Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq37374 646 1e-180 seq6 259 5e-64 seq5 102 9e-17 seq10 96.9 4e-15 >seq37374 Length=151683 Score = 646 bits (716), Expect = 1e-180 Identities = 738/986 (75%), Gaps = 4/986 (0%) Strand=Plus/Plus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||| ||||| || |||||||| ||||| |||||||||||||| Sbjct 3330 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 3389 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 || || |||| | ||| ||||||||||| | ||||| ||| ||||| || | Sbjct 3390 GCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGGAT 3449 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 || ||||| ||||| ||||| | || || ||||| ||||| | ||| | ||| | |||| Sbjct 3450 TGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTAAAC 3509 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 ||||| || || || ||||||||||| | ||| || || | ||||||| ||||||||| Sbjct 3510 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 3569 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 ||||| |||||||| | || || || || || |||||||| ||||||||||||||| Sbjct 3570 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 3629 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || |||||||| || ||||||| | || || |||||||||| ||||| | | Sbjct 3630 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCCTG 3689 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | |||||| || | ||||||||||| ||| |||||| | || ||||||||| Sbjct 3690 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 3749 Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452 ||||| || || ||||||||||| ||||||||||| || ||||| || ||||| || ||| Sbjct 3750 CCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACA 3809 Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512 | ||| | ||||| || || || || || || ||||| ||||| || || ||||| Sbjct 3810 ATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTTCCTTGA 3869 Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 || | |||||| | | ||| ||||||| || |||||||| ||||| || || |||||| Sbjct 3870 CCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACA 3929 Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632 ||||| ||||||||||| |||||| | ||||||||| ||||||||||||| |||| Sbjct 3930 GCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGT-AGCA 3988 Query 84633 A-ATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCA 84691 | | |||||| | |||||| | |||| |||| |||||| || || || |||| ||| Sbjct 3989 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCA 4048 Query 84692 TTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGA 84751 ||| || | | ||||||||||| || ||||| ||||| | ||| ||||| ||| | Sbjct 4049 TTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCAGAAGT 4108 Query 84752 TGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTC 84811 |||| | |||||||||||||| |||||||| || | ||||| |||| || ||||| Sbjct 4109 AGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTC 4168 Query 84812 ACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAG 84870 ||| ||||| |||||||| ||||| || ||| | | || || || || || ||||| || Sbjct 4169 ACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA-AG 4227 Query 84871 TGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGT 84930 | |||| | || ||| |||||||| | | |||||||| |||| || | ||| || | Sbjct 4228 TTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTT 4287 Query 84931 TAGTGGAGGTGACCCAATCACAGAAG 84956 ||| ||| | ||||| ||||||| Sbjct 4288 CGGTGCTGGTTATCCAATTACAGAAG 4313 >seq6 Length=19356003 Score = 259 bits (286), Expect = 5e-64 Identities = 311/423 (74%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 83978 ATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACG 84037 ||| || || || ||||| || |||||||| | ||| |||||||||||||| || || Sbjct 3411196 ATCTAAAGGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGTTAGCTCG 3411137 Query 84038 ATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATT 84097 |||| | ||| ||||||||||| | ||||| ||| ||||| | | || || Sbjct 3411136 GTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAATTACGGATTGGTT 3411077 Query 84098 GAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAAT 84157 ||| ||||| ||||| | || || |||| ||||| | ||| | ||| | ||||||||| Sbjct 3411076 GAAATTAAAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCGGTAAACCAAAT 3411017 Query 84158 GCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGC 84217 || || | ||||||||||| | ||| || | | ||||||| ||||||||| || Sbjct 3411016 ACCTACTATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAACGAGAATTGTTGAAACTTGC 3410957 Query 84218 ATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTC 84277 ||| |||||||| | || || || ||| | |||||||| ||||||||||||||||| || Sbjct 3410956 ATATTGGAAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATTATAAGTTTCTTC 3410897 Query 84278 TTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAG 84337 ||||||||| || |||||||| | ||| | |||||||||| ||||| | || | Sbjct 3410896 TTCTTGACCAAATTTGTAACCTTCATTTGCAAATTCATTTTCTGTGGTTTCCCTTATCAA 3410837 Query 84338 AGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGC 84397 | |||||| || | ||||||| ||| | | |||||| | || |||||||||||||| Sbjct 3410836 ACTAGAAGTTACCAAGGAACCATCCATAGTACTGAATAGGGAGCCGCCGAATACACCAGC 3410777 Query 84398 AAC 84400 || Sbjct 3410776 TAC 3410774 >seq5 Length=30687117 Score = 102 bits (112), Expect = 9e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 84143 AGCAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACT 84202 ||| | ||||||||| || || || ||||||||||| | || || || | | ||||| Sbjct 28538898 AGCGGTAAACCAAATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAAAACGAAA 28538839 Query 84203 ATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAAT 84262 | | ||||| | ||| |||||||| | || || || || || ||||||| |||| Sbjct 28538838 ACTATTGAAACTTGTATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGTTTCAAT 28538779 Query 84263 ATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACC 84298 |||||||||||| || |||||||| || ||||||| Sbjct 28538778 ATTATAAGTTTCTTCCTCTTGACCAAATCTGTAACC 28538743 >seq10 Length=40424437 Score = 96.9 bits (106), Expect = 4e-15 Identities = 170/243 (70%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 84611 CCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATA 84670 ||| |||||||||||||| | | |||||| | |||||| | |||| |||| ||| Sbjct 28819042 CCACTCACGACCCATGTAGTAAGCTACACCAAATAAGAAGTGTAGAACAATTAGTTCATA 28818983 Query 84671 AGGTCCACCATTATATA---GCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAA 84727 ||| ||||| || ||| |||||| || | | ||||||||| | | ||||| || Sbjct 28818982 AGGACCACCGTTGCATAACCACCATTCATCAACAGAAGCTGCTTCCTAGGTTGGATAAAA 28818923 Query 84728 ATGTAGACCAATAGCATTAGA---GGATGGAACTA-CGGCACCAGAAATGATGTTGTTTC 84783 ||| | ||| | || ||| | | | || |||| |||||| ||||||| ||||||| Sbjct 28818922 ATGCAAACCTACAG--TTACATACGTAAGG-ACTATTTGCACCACAAATGATATTGTTTC 28818866 Query 84784 CGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCAC 84843 | || | ||||| |||| | | || | | |||| |||||||| |||| || ||| Sbjct 28818865 CATAAAGTAGAGATCCAGAAAGAGACTTATGAATACTATCAATATCTACTGATGGGGCAA 28818806 Query 84844 CAA 84846 ||| Sbjct 28818805 CAA 28818803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571006708115000