Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq37374 480 2e-131 seq6 203 1e-47 seq5 91.5 4e-14 >seq37374 Length=151683 Score = 480 bits (532), Expect = 2e-131 Identities = 702/986 (71%), Gaps = 6/986 (1%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || || ||||| || | |||||||| || || | Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || ||| | | || ||| | ||| ||||| | || || ||||| || || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACTTC-TGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || |||||||| ||||| || || || | || |||||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | |||||||| ||||| Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 |||||||| | | | || || ||| ||||||| ||||| || ||| |||| ||| | Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 26101 CTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAGTGGGAACTATCTTAC 26158 | ||||||||| | || ||||| || | ||| || | |||||||||| || Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGTCGTGAGTGGGAACTTAGTTTT 3956 Query 26159 AGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTC 26218 | || || ||| | || ||||| |||||||||| |||| || | | || ||| Sbjct 3955 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACT 3896 Query 26219 GCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGT 26278 || || ||||| | |||||| | || ||||| || ||| ||||| |||||||| || Sbjct 3895 GCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGA 3836 Query 26279 ATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCAC 26338 || ||||||||||| || |||||| | ||||| || || || |||||||| || ||||| Sbjct 3835 ATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCAT 3776 Query 26339 CCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCAC 26398 ||||| || ||| ||||| ||||| || ||||| || | || ||| ||||||||| Sbjct 3775 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 3716 Query 26399 GGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTAT 26458 || ||||| ||||| | || ||||| ||||| | | || ||| | Sbjct 3715 GGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAA 3656 Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || | ||||| ||||| ||||| || ||||||||||| ||||| || || || ||| Sbjct 3655 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTT 3596 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || |||| || || || ||||| ||||| || || |||||| | |||||||| || Sbjct 3595 GGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTA 3536 Query 26579 GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTT 26638 ||| ||||||| || || || || ||| | || || | |||||| |||| ||||| || Sbjct 3535 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTC 3476 Query 26639 AACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCT 26698 ||| ||||||||||||| || ||||| || ||||| ||| | | || ||||| | Sbjct 3475 AACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAAT 3416 Query 26699 ACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAAT 26758 || ||||||||| | | |||||||||||||| || | ||||| ||||| || |||||| Sbjct 3415 ACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAAT 3356 Query 26759 GCTCATAACTTTCCACTTGACTTAGC 26784 |||||||| || || || || |||| Sbjct 3355 GCTCATAATTTCCCTCTAGATCTAGC 3330 >seq6 Length=19356003 Score = 203 bits (224), Expect = 1e-47 Identities = 305/432 (71%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 26356 TGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTC 26415 ||| ||||| || ||||| || | || ||| | ||||| | || ||||| ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 26416 CTCACTTATTGCAGAAACGACAGAG---GAAGTCTCACAGAATTATGGCTATAAGTTTGG 26472 | || ||||| ||||| ||| | || ||| | || || || ||||| Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCA---AATGAAGGTTACAAATTTGG 3410889 Query 26473 GCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTT 26532 ||||| ||||| || ||||||||||| ||||| || | || ||||| |||| || || Sbjct 3410890 TCAAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTT 3410949 Query 26533 TCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGT 26592 || ||||| ||||| || || |||||| | | |||||| || ||| ||||||| | Sbjct 3410950 CCAATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTAT 3411009 Query 26593 TGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTT 26652 || || || ||| | || || | |||||| |||| |||| || ||| |||||||||| Sbjct 3411010 AGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTT 3411069 Query 26653 TAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGT 26712 ||| || ||||| || ||| | ||| | | || ||||| ||| ||||||||| | Sbjct 3411070 TAATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATAT 3411129 Query 26713 ATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCC 26772 | |||||||||||||| || | ||||| ||| | || |||||||||||||| || || Sbjct 3411130 TATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 Query 26773 ACTTGACTTAGC 26784 | || ||||| Sbjct 3411190 TTTAGATTTAGC 3411201 >seq5 Length=30687117 Score = 91.5 bits (100), Expect = 4e-14 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 26468 TTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTA 26527 ||||| ||||| ||||| || |||||||||| |||| || || || ||||| |||| Sbjct 28538752 TTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTTGGCCGATTG 28538811 Query 26528 ATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGG 26587 || || || ||| | ||||| |||| |||| | | ||||||||||| ||| ||||| Sbjct 28538812 ATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTAGCTGCTTGG 28538871 Query 26588 CCGGTTGTTGGCATATGG 26605 || || || || || ||| Sbjct 28538872 CCTGTAGTAGGTATTTGG 28538889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146661278697000