Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq37374 536 4e-148 seq6 170 6e-38 seq5 93.3 1e-14 seq10 82.4 2e-11 >seq37374 Length=151683 Score = 536 bits (594), Expect = 4e-148 Identities = 713/989 (72%), Gaps = 6/989 (1%) Strand=Plus/Plus Query 35970 GCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAG 36029 || ||||| || || ||||| || || || ||||| |||||||| |||||||| || | | Sbjct 3327 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 3386 Query 36030 TCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACT 36089 | || ||||||| ||| |||||||| || | || | || | |||||| || Sbjct 3387 TTAGCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACG 3446 Query 36090 GACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTA 36149 || || ||||| ||||| || || | || |||||||||||| || || | ||||||| Sbjct 3447 GATTGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTA 3506 Query 36150 AGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTA 36209 | ||| || | || ||||||||||| ||||||||||||||| || ||| || Sbjct 3507 AACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTG 3566 Query 36210 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 36269 || || ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 3567 AAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAA 3626 Query 36270 GTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCA 36329 || ||||| ||||| || ||| | || || | || |||||| | || ||||| Sbjct 3627 GTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCC 3686 Query 36330 CGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 36389 | || | ||||| || | || ||||||||| ||||| | || |||||| Sbjct 3687 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 3746 Query 36390 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 36449 || || || ||||| | ||| || || ||||||||||| ||||| || || |||||||| Sbjct 3747 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAAT 3806 Query 36450 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 36509 |||| ||||||||||||||| || ||||| || |||||||||||||| || || || ||| Sbjct 3807 ACAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTTCCT 3866 Query 36510 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 36569 || |||| ||| |||| ||||| |||||| || ||||||||||| |||||||| || Sbjct 3867 TGACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCA 3926 Query 36570 ACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA---AG 36626 ||| ||||| || | |||||| || | | ||||||||||||| | || |||| || Sbjct 3927 ACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAG 3986 Query 36627 TAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATAT 36686 ||||| | ||||| | ||||| | ||||| |||| ||| || || ||||| ||| Sbjct 3987 CAAGCT---ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTAT 4043 Query 36687 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTC 36746 ||||| || || | | || |||||||| || || || || || | ||| || || Sbjct 4044 AACCATTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCA 4103 Query 36747 GATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACA 36806 || | || | || || ||||| ||||| ||||||||||| |||| | ||| || ||| Sbjct 4104 GAAGTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACA 4163 Query 36807 GGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCT 36866 ||||||||||||||||| ||||| || ||||| ||||| | ||| || || | |||| | Sbjct 4164 GGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACA 4223 Query 36867 GTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGG 36926 | ||| || || | | ||| ||||| | || |||||||| || | || || || Sbjct 4224 GAAGTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGA 4283 Query 36927 TTGTTTGTACTTGTAACCCAGTCACATAA 36955 || | || || || | ||| | ||| || Sbjct 4284 TTTTCGGTGCTGGTTATCCAATTACAGAA 4312 >seq6 Length=19356003 Score = 170 bits (188), Expect = 6e-38 Identities = 226/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 35985 GGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCGGCACGGTTAAGA 36044 || || || || || ||||| |||| ||| |||||||| || | || || ||||||| | Sbjct 3411189 GGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGTTAGCTCGGTTAATA 3411130 Query 36045 ATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGACTGATTGAAGTTA 36104 || |||||||| || | || | || | ||||| || || || ||||| ||| Sbjct 3411129 ATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAATTACGGATTGGTTGAAATTA 3411070 Query 36105 AAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATGCAAGTG 36164 || || || | || ||| |||||||| || || | |||||||| ||| || | Sbjct 3411069 AAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCGGTAAACCAAATACCTACT 3411010 Query 36165 ACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGG 36224 | ||||||||||| ||||||||| ||||| || ||| || || || ||||| ||| Sbjct 3411009 ATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAACGAGAATTGTTGAAACTTGCATATTGG 3410950 Query 36225 AAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGG 36284 ||||| | || ||||| ||| ||||||| || ||||| ||||| || ||||||||||| Sbjct 3410949 AAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATTATAAGTTTCTTCTTCTTGA 3410890 Query 36285 CCGAATTTATATCC 36298 || ||||| || || Sbjct 3410889 CCAAATTTGTAACC 3410876 >seq5 Length=30687117 Score = 93.3 bits (102), Expect = 1e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 36143 AGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCT 36202 |||||||| ||| || | || ||||||||||| || |||||||||||| || Sbjct 28538898 AGCGGTAAACCAAATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAAAACGAAA 28538839 Query 36203 ATTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAAT 36262 | |||| || || | ||| |||||||| | || ||||| || |||||||| | |||| Sbjct 28538838 ACTATTGAAACTTGTATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGTTTCAAT 28538779 Query 36263 GTTATACGTCTCTTCTTCTTGGCCGAATTTATATCC 36298 ||||| || ||||| ||||| || ||| | || || Sbjct 28538778 ATTATAAGTTTCTTCCTCTTGACCAAATCTGTAACC 28538743 >seq10 Length=40424437 Score = 82.4 bits (90), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 36625 AGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTAT 36684 |||||||| | ||||| | ||||| | ||||| |||| ||| || || ||||| Sbjct 28819025 AGTAAGCT---ACACCAAATAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGC 28818969 Query 36685 ATAACCAC---TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGA--- 36738 |||||||| || || | | || |||||| || |||| || || || | ||| | Sbjct 28818968 ATAACCACCATTCATCAACAGAAGCTGCTTCCTAGGTTGGATAAAAATGCAAACCTACAG 28818909 Query 36739 TTGCGTTCGATGATGGGACGATT-GCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCT 36797 || | | || | | |||| ||| || ||| | ||||| ||||||||||| |||| | | Sbjct 28818908 TTACATACG-TAA--GGACTATTTGCACCACAAATGATATTGTTTCCATAAAGTAGAGAT 28818852 Query 36798 CCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAA 36846 || || | || || | |||||| ||| ||||| || | || ||| ||| Sbjct 28818851 CCAGAAAGAGACTTATGAATACTATCAATATCTACTGATGGGGCAACAA 28818803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150387624105750