Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq37374 533 4e-147 seq6 196 1e-45 seq5 102 2e-17 >seq37374 Length=151683 Score = 533 bits (590), Expect = 4e-147 Identities = 712/987 (72%), Gaps = 2/987 (0%) Strand=Plus/Plus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 || |||||||| || ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct 3327 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 3386 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311 || || ||||| | | ||| ||||| || | | | ||| | ||||| || Sbjct 3387 TTAGCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACG 3446 Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371 || || ||||| ||||| || || | || |||||||||||| ||| || | || |||| Sbjct 3447 GATTGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTA 3506 Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431 | ||| || | || || ||||||| ||| ||||||||||||||| ||| |||||| Sbjct 3507 AACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTG 3566 Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491 || || ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 3567 AAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAA 3626 Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551 |||||||||||||| || ||| | || || | || || | | || ||||| Sbjct 3627 GTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCC 3686 Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611 | || | |||||| || | |||||||||||| ||| | | || |||||| Sbjct 3687 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 3746 Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 || ||||| ||||| | |||||| || ||||||||||| ||||| || || ||||| ||| Sbjct 3747 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAAT 3806 Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCC 5731 || | |||||| || ||||||||||| || || |||||||||||||| || ||||| Sbjct 3807 ACAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTTCCT 3866 Query 5732 TGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790 || || | ||| || | || || || | |||| || || ||||| || ||||||||||| Sbjct 3867 TGACCAATAGGATAGATCAAGAAAACAGCAGTA-GCGGCTGCAACAGGAGCTGAATATGC 3925 Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850 || |||||| || ||||| || | | ||||||||||||| | || |||| ||| Sbjct 3926 AACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA 3985 Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910 || | ||||| | |||||| | || | |||| || || || || ||||| | Sbjct 3986 GCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAA 4045 Query 5911 CCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGA 5970 ||||||||| | | ||||||||||| || ||||| || || || || || || || Sbjct 4046 CCATTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCAGA 4105 Query 5971 GCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGG 6030 | || | || || || || ||||| ||||||||||| ||||||||||| | || || Sbjct 4106 AGTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGG 4165 Query 6031 TTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGT 6090 ||||| || || || || || ||||| || ||||| | || || | |||||| ||| Sbjct 4166 CTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA 4225 Query 6091 AGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTT 6150 |||||| || || | | || ||||| || ||||||||||| || | || || || || Sbjct 4226 AGTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATT 4285 Query 6151 GTTGGTGCTAGTAACCCAGTCACAGAA 6177 | |||||| || | ||| | |||||| Sbjct 4286 TTCGGTGCTGGTTATCCAATTACAGAA 4312 >seq6 Length=19356003 Score = 196 bits (216), Expect = 1e-45 Identities = 239/326 (73%), Gaps = 0/326 (0%) Strand=Plus/Minus Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254 |||| ||| | || || || |||||||| ||||| | ||||||||||||||||||||| Sbjct 3411201 GCTAAATCTAAAGGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGTTA 3411142 Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314 || ||||| | | ||| ||||| || | | | ||| | |||| || || Sbjct 3411141 GCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAATTACGGAT 3411082 Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGC 5374 || ||||| ||||| || || | || ||| |||||||| ||| || | || ||||| | Sbjct 3411081 TGGTTGAAATTAAAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCGGTAAAC 3411022 Query 5375 CATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAG 5434 || || | || | ||||||| ||| ||||||||| ||||| ||| |||||| || Sbjct 3411021 CAAATACCTACTATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAACGAGAATTGTTGAAA 3410962 Query 5435 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTT 5494 || ||||| |||||||| | || ||||| ||| ||||||| || ||||| ||||| ||| Sbjct 3410961 CTTGCATATTGGAAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATTATAAGTT 3410902 Query 5495 TCTTCCTCTTGGCCGAATTTATATCC 5520 ||||| ||||| || ||||| || || Sbjct 3410901 TCTTCTTCTTGACCAAATTTGTAACC 3410876 >seq5 Length=30687117 Score = 102 bits (112), Expect = 2e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 5365 AGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCT 5424 || ||||| ||| || | || || ||||||| ||| || |||||||||||| ||| Sbjct 28538898 AGCGGTAAACCAAATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAAAACGAAA 28538839 Query 5425 ATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAAT 5484 | | || || || | ||| |||||||| | || ||||| || |||||||| | |||| Sbjct 28538838 ACTATTGAAACTTGTATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGTTTCAAT 28538779 Query 5485 GTTATACGTTTCTTCCTCTTGGCCGAATTTATATCC 5520 ||||| |||||||||||||| || ||| | || || Sbjct 28538778 ATTATAAGTTTCTTCCTCTTGACCAAATCTGTAACC 28538743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152581849814250