Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq37374 533 2e-146 seq6 230 3e-55 seq5 91.5 2e-13 >seq37374 Length=151683 Score = 533 bits (590), Expect = 2e-146 Identities = 698/965 (72%), Gaps = 6/965 (1%) Strand=Plus/Minus Query 162523 GACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCA 162582 || ||||| | || | || ||||| ||||| |||||||| ||| || | | ||| Sbjct 4288 GAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCA 4229 Query 162583 GCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGA 162642 | || || || || || || || || || |||||||| ||||| |||||||| | Sbjct 4228 ACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGT 4169 Query 162643 GAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCT 162702 || |||||| | || || || || ||||| ||||| ||||| |||||||| | ||||| Sbjct 4168 GAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCT 4109 Query 162703 AGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAG 162762 | ||| ||||| ||| | || || ||||| || ||||||||||| || ||||||| Sbjct 4108 ACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAA 4049 Query 162763 TGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 162822 ||||| || || || || |||| |||| | || | |||||| | | || | | Sbjct 4048 TGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 3989 Query 162823 GCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGT 162882 ||| |||||| ||||||||||| || || | ||||||||||||||||| | Sbjct 3988 TGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCT 3929 Query 162883 GTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGT 162942 |||||||| || || || || | || || ||||| |||||| |||||||| | ||| Sbjct 3928 GTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGT 3869 Query 162943 CAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTC 163002 ||||| || || || | |||||||| || |||||||||||||| || | ||| | Sbjct 3868 CAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATT 3809 Query 163003 GTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGT 163062 || || || || ||||| || || || ||||| || || || ||| | || || || ||| Sbjct 3808 GTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGT 3749 Query 163063 GTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATC 163122 |||||||| || || || || ||||||||||| ||||| | || |||||| | | ||| Sbjct 3748 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATC 3689 Query 163123 AGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAG 163182 || ||||| || || | || || || | ||||| | || || ||||| ||||| Sbjct 3688 AGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAA 3629 Query 163183 ACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCT 163242 ||||| || ||||| ||||||||||| || ||||| || ||||||||||| |||||| | Sbjct 3628 ACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGT 3569 Query 163243 TTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGG 163302 |||||||| || ||||| | || |||||||| ||||| | ||||| || | || ||| Sbjct 3568 TTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 3509 Query 163303 TTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAA 163362 || || || | ||| | |||||||| |||||| | || ||||| || ||||||||| Sbjct 3508 TTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAACCAA 3449 Query 163363 TCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGA 163419 ||||| ||||| |||| || || || ||| ||||| ||||| ||||| || Sbjct 3448 TCCGTAGTTGATAGTCAAGGTCGT---GTAATAAATACCTGGGCTGATATTATTAACCGA 3392 Query 163420 GCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTT 163479 || |||||||||||||| ||||| || ||||||||||| || ||||| || || || Sbjct 3391 GCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTA 3332 Query 163480 GCTGC 163484 ||||| Sbjct 3331 GCTGC 3327 >seq6 Length=19356003 Score = 230 bits (254), Expect = 3e-55 Identities = 303/419 (72%), Gaps = 6/419 (1%) Strand=Plus/Plus Query 163054 GTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCT 163113 || || ||||||||||| || || || || ||| ||||| | ||||| | || |||||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 163114 TCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAA 163173 | | || || ||||| || || | || | || | ||||| || || || ||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 163174 GAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAG 163233 |||||||| ||||| || ||||| |||||||||| || ||||| || ||||||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 163234 TATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTC 163293 |||||| ||||||||| || ||||| | | |||||||| ||||| | ||| | || Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 163294 TGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAAC 163353 | || ||||| || || | ||| | ||||||| |||||| | || ||||| || Sbjct 3411014 GGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAAT 3411073 Query 163354 TTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATC 163410 |||||||||||||| |||| |||| || || || ||| ||||| ||||| Sbjct 3411074 TTCAACCAATCCGTAATTGATAGTCAAGGTCGT---GTAATAAATACCTGGGCTGATATT 3411130 Query 163411 CTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCC 163469 ||||| |||| |||||||||||||| ||| | || ||||||||||| || || || Sbjct 3411131 ATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq5 Length=30687117 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 163156 GGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTT 163215 ||||| | || || ||||| ||||| ||||| || |||| |||||||||| || ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 163216 GGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTT 163275 || || ||||||||||| ||| || |||||| | | |||| | || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 163276 GCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGC 163310 ||||| | ||||| || | || ||||| || || Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552826405695000