Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 214 3e-50 >seq3 Length=41204908 Score = 214 bits (236), Expect = 3e-50 Identities = 568/853 (67%), Gaps = 20/853 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| |||||||| | ||||| |||||||| |||||||||| || ||| || ||| Sbjct 26200051 CTGGTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATCAGCTC 26200110 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957 ||| | ||| ||||| || || |||||| | | |||| | || |||| Sbjct 26200111 CATCCAATCGAATGGGTTCTGTACATTGTACACCT-TCCCGCACCCAAGGGCACCGAGCA 26200169 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 ||| || || |||| ||||| | ||| | || |||||| || | | | Sbjct 26200170 ACCTATCAGCAACAAACTCAATGTACTGACTCATCAAGGCCCCGTTCATCCCCACCAACG 26200229 Query 48018 -ACACGGGCAAAGCCTTTGTGAGA--AACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 ||| || |||| | ||| |||||| |||| || | ||| || || | ||||| Sbjct 26200230 CACAAGG---AAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACAGCATCGCGCACAA 26200286 Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 ||| | | ||||| ||| | | | ||| | |||| | | ||||||| ||| | Sbjct 26200287 TCTCCCTCACGCGCTCCTCGGGGAGCTTGGTCCGCATAA---TAGAGTAGAGCAGGCAAG 26200343 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| | || | || ||||| ||| |||||| |||||||||| ||| || | Sbjct 26200344 CGAAGTCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTG 26200403 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAG-AGCCAGAGAAGAAGATG 48253 |||||| |||| | ||||||||||| | || || |||| || ||||||||||| Sbjct 26200404 GCATGAGGCCCCGTTTCTTGAGCCAGAAGA-TGGAGCAAAAGCTTCCGGAGAAGAAGATA 26200462 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || ||| ||| | ||| |||| || || ||| |||| Sbjct 26200463 CCCTCGACGCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGACTCGGAGGAGTC---GATC 26200519 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 ||| || ||||||| |||||||| ||| ||| || || || || ||||| | ||| Sbjct 26200520 CAGCGGAGGGCCCAGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGCGTGAAAG 26200579 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | ||| | | ||| | ||||| ||| || ||||||||| Sbjct 26200580 AGACGGGTTTTCTCTACGGAGTCTTTTATGTAGGTTTCGAGGAGGAGGCTGTACATCTCG 26200639 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| |||||||||||||| ||||| ||||| | ||||| | ||||| Sbjct 26200640 GAGTGAATGTTCTCGATAGCGATCTGGAAGCCGTAAAAGGCGCGAGCCTCGGAGACCTGG 26200699 Query 48494 ACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || || | | || || || || || || || || || || || || || || Sbjct 26200700 ACCTC-CTTCATAAAACGGCCGGCAAGGTTTTCTAGTACGATGCCGTCGGAGGCGGCGAA 26200758 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAG-CCCT 48611 |||||| |||||||| | | ||||||||||||| || ||| |||| |||||| || Sbjct 26200759 GAAGGCGAGGACATGGGTGACGAAATGGCGCTCGCCGTCGGTAAGAGTGTTCCAGTGACT 26200818 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGT 48671 | | ||| | |||||||| || ||| | |||||||| || || |||||| |||| Sbjct 26200819 G-ATGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCTGCTTTCTTGT 26200877 Query 48672 ACATGCCCCATAT 48684 |||| |||| || Sbjct 26200878 ACATTTCCCAGAT 26200890 Score = 154 bits (170), Expect = 3e-32 Identities = 429/650 (66%), Gaps = 16/650 (2%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| ||||||| | || ||||| | |||||||| ||| ||||| ||| | | | Sbjct 34261428 AAACTCCCTCTCTATGTCAACCGCTTCGCGCACAATCTCCTTCACGCGTTCCTCGGTGAG 34261369 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || || | ||| | | |||| ||| || ||||| | ||| | ||||| || Sbjct 34261368 CTTCTTCCTGAGGAGAGAGTACAAGAG---GCACGCGAAGTCGCAGTGAAGCCCTTCATC 34261312 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || |||||| ||||||||||| |||||| ||||| | || | || |||||||| Sbjct 34261311 TCGCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAGCCACGCTTCTTGAGCCA 34261252 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 || || | ||| ||| ||||||||||| ||||| || ||||| ||| ||| Sbjct 34261251 AAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCAACGCAGGCGAAGGCGACGAG 34261192 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG-GAAAGCGCCCAGTCTGCCTTCT 48338 | ||| |||| || || || | ||||||| | ||| ||||| | ||||||| Sbjct 34261191 GCGCTCGGCGAAGGA---GTCGGTGGCATCGATCCAGCGCAAG-GCCCATTGGGCCTTCT 34261136 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCG 48398 | || || || || || || | ||| ||||| || | || || | ||| Sbjct 34261135 TGGCGACACAGGGGATGGTATCGACGGCGCGGAACAGGTGATTCTTTTCGGTGGAGTCTT 34261076 Query 48399 CAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 | ||||| ||| || | ||||||||| ||||| | ||||| || |||| Sbjct 34261075 TGATGTAGGTTTCCAAGAGGAGACT---GTACATCTCGGAGTGGATGTTCTCGATGGCGA 34261019 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 ||||||| |||||||| || | ||||| | || | ||| | ||| | || Sbjct 34261018 TCTGGAAGCCGTAGAAAGCACGAGCCTCGGCGGCTTGGATTTCCTTCATGAAGC-GGGCA 34260960 Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || || || || || || || || || || ||||||||||| |||| || | | | Sbjct 34260959 GCGAGGTTTTCGAGAACGATGCCGTCGGAGGCGGCAAAGAAGGCGAGGATGTGGGTGATG 34260900 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACT 48634 || ||||||||| || |||||| | | |||| | | ||||| | ||||| || Sbjct 34260899 AAGTGGCGCTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGAGGTCTTGGGAGAGGTCAACC 34260840 Query 48635 TCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 ||||| | |||||||| || || ||||| |||||||| |||| || Sbjct 34260839 TCTTCGGCGGTCCAGAAAGAAGCTTCGGCTTTCTTGTACATTTCCCAGAT 34260790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931097599520000