Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 149 1e-30 >seq3 Length=41204908 Score = 149 bits (164), Expect = 1e-30 Identities = 384/570 (67%), Gaps = 15/570 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || ||| |||||| || || ||| | || || Sbjct 26200890 ATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTTCTGGACGGCGGAGGAGGTGGACCTC 26200831 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | ||||||| |||| || |||| || | | ||||| ||||| ||| | Sbjct 26200830 TCGCAGGACATCAGTCACTGGAACACTCTTACCGACGGCGAGCGCCATTTCGTCACCCAT 26200771 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || ||||| || ||||| || || || || || || || || | || Sbjct 26200770 GTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTAGAAAACCTTGCCGGCCGTTTT 26200711 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGC-CAAGTGTTTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| || ||| | ||||| | | ||| ||||| |||||||| || ||||| Sbjct 26200710 ATGAAGGAGGTCCAGGTCTCCGAGGCTCGCGCCTTT-TACGGCTTCCAGATCGCTATCGA 26200652 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 || | ||||| ||| |||| | || || || ||||| | |||| || || Sbjct 26200651 GAACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATAAAAGACTCCGTAGA 26200592 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 || | || || ||| ||||| || ||| ||| || ||| | |||||| || Sbjct 26200591 GAAAACCCGTCTCTTTCACGCCATTGACACCATTCCCTGCGTCACCAAGAAGGCCAACTG 26200532 Query 25836 GGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 |||| | |||||| || | | ||| || || |||||| || || ||||||| Sbjct 26200531 GGCCCTCCGCTGGATCGACTCCTCCGAGTCCTTCGC----CGAGCGCCTCGTCGCCTTTG 26200476 Query 25895 C-TGCTGTGGAGGGCATCTTTTTCAGCGGTT-CGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 | ||| || ||||| ||||| ||| ||| | ||||| ||||||||||||||||| | Sbjct 26200475 CCTGC-GTCGAGGGTATCTTCTTCTCCGGAAGCTTTTGCT-CCATCTTCTGGCTCAAGAA 26200418 Query 25953 GAAGGGGAC-CATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 | |||| | |||||| || || ||||| |||||||| |||||| | | ||||||||| Sbjct 26200417 -ACGGGGCCTCATGCCAGGACTC-ACTTTCTCCAACGAACTCATCTCCCGCGACGAGGGT 26200360 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||||| | || || || |||||||||||| Sbjct 26200359 CTCCATTGCGACTTCGCTTGCCTGCTCTAC 26200330 Score = 127 bits (140), Expect = 4e-24 Identities = 373/563 (66%), Gaps = 15/563 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || || |||||||||||||||| |||| || Sbjct 34260790 ATCTGGGAAATGTACAAGAAAGCCGAAGCTTCTTTCTGGACCGCCGAAGAGGTTGACCTC 34260849 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 || | ||| | | |||| || | || || | | ||||| || || ||| || Sbjct 34260850 TCCCAAGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCAC 34260909 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 | | || |||||||| ||||| || || || || ||| || || | | ||| Sbjct 34260910 ATCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCTGCCCGCTTC 34260969 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCGA 25715 | | |||| | || || |||| | ||| ||||||||| |||||||| |||||||| Sbjct 34260970 ATGAAGGAAATCCAAGCCGCCGAGG-CTCGTGCTTTCTACGGCTTCCAGATCGCCATCGA 34261028 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGC 25772 || | ||||| ||| |||| || || || || || ||||| | |||| | | Sbjct 34261029 GAACATCCACTCCGAGATGTA---CAGTCTCCTCTTGGAAACCTACATCAAAGACTCCAC 34261085 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 ||| | ||| ||||| | ||| |||| ||| ||| | || | |||||| | Sbjct 34261086 CGAAAAGAATCACCTGTTCCGCGCCGTCGATACCATCCCCTGTGTCGCCAAGAAGGCCCA 34261145 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||| || |||||| | ||| | || | || | |||||| || || ||||| Sbjct 34261146 ATGGGCCTTGCGCTGGATCGA-TGCC--ACCGACTCCTTCGCCGAGCGCCTCGTCGCCTT 34261202 Query 25893 TG-CTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 | |||| || ||||| ||||| ||| ||| | | ||| | || || ||||||||| Sbjct 34261203 CGCCTGC-GTTGAGGGAATCTTCTTCTCCGGCAGCTTCTGC-TCGATATTTTGGCTCAAG 34261260 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||||| || ||| |||||||| |||||| | || || || Sbjct 34261261 AAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAAGGG 34261320 Query 26011 CTCCACAGAGATTTTGCCTGCCT 26033 || ||| | || || || ||||| Sbjct 34261321 CTTCACTGCGACTTCGCGTGCCT 34261343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928410855320000