Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq37374 589 2e-163 seq6 246 3e-60 seq9 212 6e-50 seq5 118 1e-21 seq456 87.8 2e-12 >seq37374 Length=151683 Score = 589 bits (652), Expect = 2e-163 Identities = 714/967 (74%), Gaps = 4/967 (0%) Strand=Plus/Minus Query 8269 ACCAATAATCGCTTGTATGTCGGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTGCC 8328 ||| | ||||| | || | || |||||||| ||| | ||||| || || || ||| | Sbjct 4291 ACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACT-TTATTGAC 4233 Query 8329 -GCTACAATTTGCTTCATTACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCAT 8387 || || | || |||| ||| || | ||||| ||||| || || || || || || Sbjct 4232 TGCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTAT 4173 Query 8388 CCGCGAACCAGTTGCTGGATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGT 8447 || || || ||| |||||||||| | || || ||||| ||||| |||||||| || | Sbjct 4172 TCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTAT 4113 Query 8448 TCCCAGCTCTAACGCAATTGGCCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGA 8507 ||| | ||| || || || | || || || || || |||||||| |||||| |||| Sbjct 4112 TCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGA 4053 Query 8508 TGAGTGGCTCTACAACGGTGGTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGT 8567 ||| ||| | |||||||| |||||||| | || | ||| | |||||| | ||||| || Sbjct 4052 TGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT 3993 Query 8568 CT-TTGCTTATATGGGTCGTGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGA 8626 ||||| | ||||||||||| ||||||||| || || || || ||||||||||||| Sbjct 3992 AGCTTGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGA 3934 Query 8627 TCTGTGTTGCATACTCTGCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTT 8686 | ||||||||| || ||||||||||| || ||| ||||||| ||| | |||||||| Sbjct 3933 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTA 3874 Query 8687 TTGGTCAAGGTTCGTTCTCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATA 8746 |||||||||| || || |||||||||||||| || || || ||||| ||||| | || Sbjct 3873 TTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTA 3814 Query 8747 TGCTTGTCTTCCAGGCTGAGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTG 8806 || |||| || ||||||||||| || || || ||||| || || |||||| | ||||| | Sbjct 3813 TGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAG 3754 Query 8807 CTGGTGTCTTCGGCGGATCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGC 8866 ||||||| |||||||| || || || || ||||||||||| | || |||||| Sbjct 3753 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTT 3694 Query 8867 TGGTTCGTGAGACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAG 8926 || | | || ||||| |||| || || || | || |||| || |||||||| | Sbjct 3693 TGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGG 3634 Query 8927 AGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATG 8986 | |||||||| || ||||| || |||||||| || ||||| || |||||||||||||||| Sbjct 3633 AAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATG 3574 Query 8987 CATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAA 9046 || ||| ||||||||| | || ||||||||||| ||||| |||||||| || || | Sbjct 3573 CAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTA 3514 Query 9047 TCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCA 9106 | ||||||||||| | || || || |||||||||||| | ||||| || || |||| Sbjct 3513 TTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCA 3454 Query 9107 ACCAGTCCATTATCGACGGACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACC 9166 |||| ||| | | || | ||||| || || | || |||||||| || | |||||| Sbjct 3453 ACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACC 3394 Query 9167 GCGCAGGACTCGGTATGGAAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACC 9226 | || || ||||||||||| ||||| ||| | || || || || ||||| || || | Sbjct 3393 GAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATC 3334 Query 9227 TTGCGGC 9233 | || || Sbjct 3333 TAGCTGC 3327 Score = 569 bits (630), Expect = 2e-157 Identities = 727/999 (73%), Gaps = 2/999 (0%) Strand=Plus/Minus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || || || ||||||||||||||||| || Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| || ||| | || | || || ||| |||| || || || ||| Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGG-TGCTAATTTCCT 9993 || || ||||| |||||||| | |||||| ||| | || || ||| || ||| | Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGC-AACTTCTT 30983 Query 9994 TACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 10053 || || || || || || || ||| || | | | || ||| | | |||| ||||| Sbjct 30982 AACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGG 30923 Query 10054 TCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGT 10113 |||||| | ||||||||||| ||| ||| ||| | || || || ||| ||||||| Sbjct 30922 TCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGT 30863 Query 10114 GGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAG 10173 || |||||||| || |||| ||||| || || |||||||| || ||||| || || | Sbjct 30862 TGCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 30803 Query 10174 ATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGT 10233 || || | | |||||||| ||||| ||||| || || || || |||||||||||||| Sbjct 30802 ATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTGT 30743 Query 10234 CAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG 10293 ||| || || || |||||||| || |||||| ||||||||||||| || ||||| || Sbjct 30742 TTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGG 30683 Query 10294 CGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 10353 || || || || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 30682 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAAA 30623 Query 10354 TCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCA 10413 || || ||||||||||||||||||||| || |||| | || || |||| || || || Sbjct 30622 CCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTCA 30563 Query 10414 CGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGC 10473 || | || |||||||| || | | | ||||||| || ||||| || ||| || Sbjct 30562 TGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 30503 Query 10474 TTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTC 10533 |||| | || |||| ||||| || ||||| |||||||||||||| || || ||||| Sbjct 30502 TTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGTC 30443 Query 10534 CCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGT 10593 ||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||| Sbjct 30442 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 30383 Query 10594 ACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCG 10653 ||| || | ||| | |||| | || |||| | | ||| | || || || | || Sbjct 30382 ACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTACG 30323 Query 10654 TGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTT 10713 |||||| || || || |||||||| ||| | || | |||||||||||||||||||| || Sbjct 30322 TGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTT 30263 Query 10714 CTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCA 10773 ||| || || ||||| || | ||||||||| ||||||| ||||||||| | || || Sbjct 30262 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGATCA 30203 Query 10774 ACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 30202 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 30164 >seq6 Length=19356003 Score = 246 bits (272), Expect = 3e-60 Identities = 307/419 (73%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 8802 TGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCA--ATGCATGGTTCACTCGTTACT 8859 ||| |||||||| |||||||| ||| || ||| | | ||| ||||||| | || ||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGG--CTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACT 3410830 Query 8860 TCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGT 8919 ||| || | | || ||||| |||| || | | ||| | || ||||| || ||| Sbjct 3410831 TCTAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGT 3410890 Query 8920 CAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTC 8979 |||||||| |||||||| || ||||| || ||||||| ||| ||||| || ||||||||| Sbjct 3410891 CAAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTC 3410950 Query 8980 CAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTG 9039 ||||||||| ||| ||||||||| | || | ||||||||| ||||| |||||| | Sbjct 3410951 CAATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATA 3411010 Query 9040 GTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTC 9099 || || || ||||||||||| | || || || |||| ||||||| | ||||| || Sbjct 3411011 GTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTT 3411070 Query 9100 AACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTGCTCAACACCTGGGCAGACGTA 9159 || |||||||| ||| | || || | ||||| || || | || |||||||| || | Sbjct 3411071 AATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATT 3411130 Query 9160 CTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAAAGAAACGCACACAACTTCCC 9218 ||||||| || || ||||||||||| ||| | ||| | || || || || || || Sbjct 3411131 ATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq9 Length=31747250 Score = 212 bits (234), Expect = 6e-50 Identities = 234/312 (75%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 10259 GGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCCTT 10318 || |||||| ||||||||||||| || ||||| || || || || || || || ||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 10319 CTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGCT 10378 ||||| |||| || |||||||||||||| | || || || |||||||||||||||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 10379 GGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACACTT 10438 ||| || |||| | || || |||| || || || || | || |||||||| || | Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 10439 TATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAAGAAGAG 10498 | | ||||||| || ||||| || ||| |||||| | || |||| ||| | Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 10499 ACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGC 10558 || ||||| |||||||||||||| || || |||||||| || ||||| |||||||| | Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 10559 AATAAACGCTGG 10570 |||||||| ||| Sbjct 26587302 AATAAACGTTGG 26587291 >seq5 Length=30687117 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 8905 GGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTT 8964 || |||| || |||||||| || |||||||| || |||| | |||||||| || ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 8965 GGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTC 9024 || || ||||||||||||||| || ||| || | || | | || |||||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 9025 GCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGC 9059 ||||| |||||||| || || || ||||||||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 >seq456 Length=558995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 8959 TACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTC 9018 || ||||| || |||||||||||||||||| ||| ||||||||| | || |||||| Sbjct 484669 TATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTC 484728 Query 9019 TTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGG 9051 ||||| ||||| |||||||| || || || ||| Sbjct 484729 TTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516238707000000