Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=42234885 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || || || ||||| ||| ||| ||| |||| Sbjct 37712651 ATGCAAATTTTTGTCAAGACTTTGACAGGAAAGACCATAACCTTGGAAGTGGAGAGTTCA 37712592 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | || | || ||||| | || || || ||||| | ||| |||||| Sbjct 37712591 GATACAATTGACAATGTGAAAGCAAAGATTCAG-GATAAGGAGGGTATCCCCCCAGATCA 37712533 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| ||||||||||| || ||||| | ||||| | || | || |||||||| Sbjct 37712532 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGACGGAAGGACCCTTGCGGATTATAA 37712473 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 ||| || || ||||| ||||||||| |||| || || Sbjct 37712472 CATACAGAAGGAATCCACTCTGCACTTGGTTTTGAG 37712437 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || || ||||| |||||| || ||| |||| Sbjct 37703212 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 37703153 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || || | || || || ||||| | ||| ||||| Sbjct 37703152 GATACCATTGATAATGTCAAAGCCAAGATTCAG-GATAAGGAGGGTATTCCCCCCGATCA 37703094 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| ||||||||||| || ||||| | |||||| | ||| | || |||||||| Sbjct 37703093 GCAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAA 37703034 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || || || |||||| ||||| |||| || || | ||||| || || Sbjct 37703033 TATCCAGAAGGAGTCTACTTTGCACTTGGTTTTGAGGCTTCGAGGTGGCAT 37702983 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| |||||||| || || || || || |||||||| || ||| || Sbjct 37706947 AATGCAAATTTTTGTAAAGACGTTGACTGGAAAGACCATTACTTTGGAGGTTGAAAGCTC 37706888 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||| || ||||||||||| | || ||| || Sbjct 37706887 TGATACCATTGATAATGTAAAGGCAAAGATTCAGGACAAAGAGGGGATTCCACCAGACCA 37706828 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || ||||||||||| || || || |||||||| ||| | || |||||||| Sbjct 37706827 GCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAA 37706768 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 ||| || || ||||||||||||||| |||| || || Sbjct 37706767 CATCCAGAAGGAATCTACTCTGCACTTGGTGTTGAG 37706732 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || || || ||||| ||| || ||| |||| Sbjct 37707174 ATGCAAATCTTTGTCAAGACTTTGACTGGGAAGACCATAACCTTAGAGGTGGAGAGTTCA 37707115 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || || | || || || ||||| | ||| ||| || Sbjct 37707114 GATACCATTGATAATGTGAAAGCCAAGATTCAG-GATAAGGAGGGTATCCCCCCAGACCA 37707056 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| ||||||||||| || ||||| | |||||| | ||| | || ||||| || Sbjct 37707055 GCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTACAA 37706996 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 ||| || ||||||||||| |||||| |||| || || Sbjct 37706995 CATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 37706960 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||| || || ||||| || |||||||| || || ||| || Sbjct 37702757 AATGCAGATTTTTGTGAAGACTTTAACTGGGAAAACCATAACTTTGGAGGTTGAAAGCTC 37702698 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | || | ||| ||| || ||||| || || | || || || Sbjct 37702697 TGACACTATTGACAATGTAAAGGCAAAGATTCAGGACAAGGAAGGCATCCCACCGGACCA 37702638 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||||||||||||||| || || || ||||||||| || | || |||||||| Sbjct 37702637 GCAGAGACTTATCTTTGCTGGGAAGCAGTTGGAAGATGGGCGTACCCTTGCAGATTATAA 37702578 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 ||| || |||||||| ||||||||| |||| || || Sbjct 37702577 CATCCAGAAAGAATCCACTCTGCACTTGGTGTTGAG 37702542 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| |||||||| || || | || || |||||||||||| || ||| || Sbjct 37702529 AATGCAGATATTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 37702470 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||| || ||||| |||||| | || |||||| Sbjct 37702469 TGATACAATCGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGAATCCCACCAGATCA 37702410 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| ||||| ||||| || || |||||||| ||| | || |||| || || || Sbjct 37702409 GCAGAGGCTTATTTTTGCTGGGAAGCAATTGGAGGATGGTCGTACCTTGGCAGACTACAA 37702350 Query 28733 CATTCAAAAAGAATCTACTCTGCA 28756 ||||| || |||||||| ||||| Sbjct 37702349 TATTCAGAAGGAATCTACCCTGCA 37702326 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || || |||||||||||| || |||| || Sbjct 37712423 ATGCAGATTTTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAAAGCTCT 37712364 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||| || ||||| ||||| | || |||||| Sbjct 37712363 GATACAATTGATAATGTGAAGACAAAGATTCAGGACAAGGAGGGCATCCCACCAGATCAG 37712304 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||| ||||| || || |||||||||||| | || |||| || || ||| Sbjct 37712303 CAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGACTACAAC 37712244 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| |||||||| || || ||| Sbjct 37712243 ATTCAGAAAGAATCCACCCTTCAC 37712220 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || |||||||| || || || || |||||||| ||| || ||| |||| Sbjct 37712879 ATGCAGATTTTTGTAAAGACTTTGACTGGAAAAACCATAACCTTGGAGGTGGAGAGTTCA 37712820 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || ||||| || ||| |||||||||||| | || ||||| Sbjct 37712819 GATACCATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGAATCCCTCCTGATCAG 37712760 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||| || || || |||||| | || ||| | || | || ||||| || Sbjct 37712759 CAGAGGCTTATTTTCGCTGGTAAACAACTTGAGGATGGAAGGACCCTTGCTGATTACAAT 37712700 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || || |||||| |||| Sbjct 37712699 ATTCAGAAGGAGTCAACCCTGCACTTGGT 37712671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 28547 TGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGA 28606 |||| | |||||||| || || ||||| || || || ||||| || || ||| ||| Sbjct 37703447 TGTACAGATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACACTCGAGGTGGA 37703388 Query 28607 ACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGT 28666 | | || || || | | || | ||| || ||| |||||||| || | || Sbjct 37703387 ATCCTCCGATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCC 37703328 Query 28667 AGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 28726 ||||| ||||| || || || || || |||||| | || || | ||| | || || Sbjct 37703327 GGATCAGCAGAGGCTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGA 37703268 Query 28727 TTATAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| ||||||||||| ||||| ||||| ||| |||| Sbjct 37703267 TTACAACATTCAAAAGGAATCCACTCTCCACTTGGT 37703232 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | ||||| |||||||||||| || ||| ||| Sbjct 37702984 ATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACCATTACCTTGGAGGTTGAAAGTTCT 37702925 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || ||||||||||| | || |||||| Sbjct 37702924 GATACCATTGATAATGTAAAGGCTAAGATACAGGACAAAGAGGGGATTCCACCAGATCAG 37702865 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || || ||||||||||| || || || | |||||| || | || ||||||||| Sbjct 37702864 CAAAGGCTTATCTTTGCTGGGAAGCAGCTAGAAGATGGGCGTACCCTTGCTGATTATAAC 37702805 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 || || || ||||| ||||| || |||| |||| Sbjct 37702804 ATCCAGAAGGAATCCACTCTTCATTTGGTGCTAAG 37702770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425211024790125