Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq37374 621 4e-173 seq6 235 6e-57 seq9 165 9e-36 seq8 100 3e-16 seq2 100 3e-16 >seq37374 Length=151683 Score = 621 bits (688), Expect = 4e-173 Identities = 737/990 (74%), Gaps = 8/990 (1%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||| ||| | ||||||||||| || || ||||| |||| ||||| || || || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 |||||||| | ||| | | |||| || | ||| || || || || || | | ||| | Sbjct 4252 ATGATTCC-TACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4195 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || |||||||| || || |||| || || | |||||||||| Sbjct 4194 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4135 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | ||||| |||||||| |||| ||| ||||| ||||| ||| |||| || || || | Sbjct 4134 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4075 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 | ||||||||||| | | || |||||| | |||||||| ||||||| |||| ||| Sbjct 4074 TATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 4015 Query 161174 TGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTA 161231 | | |||||| | |||| | || |||| ||||||||||||||||||||||| || Sbjct 4014 TTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTT 3957 Query 161232 CCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAG 161291 |||||||| ||||||||||||||| || ||||| || |||||||| || || || | Sbjct 3956 TCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTAC 3897 Query 161292 TGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGG 161351 ||| || ||| || |||||||| | |||||||| || || |||| |||||||| || Sbjct 3896 TGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGG 3837 Query 161352 CATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCA 161411 || |||||||| ||||| | ||| |||| || || || ||||| || ||||| ||||| Sbjct 3836 AATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 3777 Query 161412 CCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCA 161471 || || || ||| | || ||||| ||||| || ||||| || || |||||||| ||||| Sbjct 3776 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 3717 Query 161472 CGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTA 161531 ||||| |||| || ||| || | | |||||||| ||||| || ||| || | Sbjct 3716 TGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGA 3657 Query 161532 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTT 161591 ||||||| || |||||||| ||||| || || || || || ||||| || || || || Sbjct 3656 AGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTT 3597 Query 161592 CGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCT 161651 || || |||| |||||||| || |||||||| || || || | || |||||||| Sbjct 3596 TGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 3537 Query 161652 TGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATT 161711 |||||||||||||| || || || ||||| || || | || | ||||| ||||| || Sbjct 3536 AGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTT 3477 Query 161712 CAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAA 161771 |||| | |||||||| || |||||||| || | ||||||||||| ||| || || || Sbjct 3476 CAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAA 3417 Query 161772 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAA 161831 |||||||| || || | ||||| ||| ||||| |||||||| ||||| || || || Sbjct 3416 TACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAA 3357 Query 161832 TGCTCACAACTTCCCTCTTGACCTTGCTGC 161861 |||||| || |||||||| || || ||||| Sbjct 3356 TGCTCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 536 bits (594), Expect = 1e-147 Identities = 731/1015 (72%), Gaps = 4/1015 (0%) Strand=Plus/Minus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || ||||||||||||||||| || ||||| || Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| || ||| | || | ||||||||| |||| || || || || Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGG-TGCAAACTTTCT 162295 || || |||||||||||||| | || ||||| ||| | || || ||||| ||| | Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAA-CTTCTT 30983 Query 162296 TACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGG 162355 || || |||||||| ||||| || | | | | || ||| | || | || ||||| Sbjct 30982 AACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGG 30923 Query 162356 TCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGT 162415 |||||| | || || || || | ||| ||||| || | || || || ||||||||||| Sbjct 30922 TCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGT 30863 Query 162416 GGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 162475 || |||||||| || || | | | |||||||||||| | || || |||||||| || || Sbjct 30862 TGCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 30803 Query 162476 A-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCG 162534 | || || | | || ||||| ||||| || || ||||||||||| |||||||| || | Sbjct 30802 ATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTG 30744 Query 162535 TTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCG 162594 || ||| |||||||| ||||| |||| || || |||||||| || || || | Sbjct 30743 TTTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTG 30684 Query 162595 GGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAA 162654 | || ||||| || || |||||| | ||||| ||||||| || ||||| ||||| ||| Sbjct 30683 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAA 30624 Query 162655 ATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTC 162714 | || ||||| |||||||| || || ||| | | || | |||| | || | ||||||| Sbjct 30623 ACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTC 30564 Query 162715 ATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAG 162774 |||| | || || |||||||| | | |||||||| || ||||| || || | Sbjct 30563 ATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 30504 Query 162775 CATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGT 162834 | ||| || | || || | |||||||| ||||| ||||||||||| || ||||| |||| Sbjct 30503 CTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGT 30444 Query 162835 CACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTG 162894 | || || || || |||||||| || || |||||||| |||||||||||| | |||| Sbjct 30443 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 30384 Query 162895 TTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTC 162954 | || || | ||| | |||| ||| || | || | | || | || || || | | Sbjct 30383 TACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTAC 30324 Query 162955 GTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGT 163014 ||||||| ||||| || ||||||||| | || || || ||||| ||||| |||||||| | Sbjct 30323 GTGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTT 30264 Query 163015 TCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACC 163074 |||| || || || ||||| | || ||||| |||| || ||| | ||| | || | Sbjct 30263 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGATC 30204 Query 163075 AACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 | |||||||| ||| || | |||||||| ||||| | ||| | || |||||||| Sbjct 30203 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 30149 >seq6 Length=19356003 Score = 235 bits (260), Expect = 6e-57 Identities = 310/430 (72%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 161431 GTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCT 161490 ||||| ||||| || ||||| || || |||||| | ||| | ||||| |||| || ||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 161491 TCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAA 161550 || | | |||||||| ||||| || | || | |||||||| || |||||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 161551 GAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAA 161610 |||||||| || || || || || ||||| || | || || || || |||| |||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 161611 TACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTT 161670 || || |||||||| || || || | | |||||||| |||||||||||| | || Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 161671 GGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAAC 161730 || || ||||| || || | || | ||||| |||| |||||| | |||||||| || Sbjct 3411014 GGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAAT 3411073 Query 161731 TTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTC 161790 |||||||| || | |||||||||| ||| || || || |||||||| || || | Sbjct 3411074 TTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATT 3411133 Query 161791 AACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTT 161850 ||||| ||| ||||| |||||||| ||| | || || |||||||| || || ||| | Sbjct 3411134 AACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTTA 3411193 Query 161851 GACCTTGCTG 161860 || | |||| Sbjct 3411194 GATTTAGCTG 3411203 >seq9 Length=31747250 Score = 165 bits (182), Expect = 9e-36 Identities = 217/301 (72%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 162573 TGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAA 162632 |||||||| || || || || || ||||| || || |||||| | ||||| ||||| Sbjct 26587590 TGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAA 26587531 Query 162633 GGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGT 162692 || || ||||| ||||| |||| || ||||| |||||||| || || ||| | | || Sbjct 26587530 GGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGC 26587471 Query 162693 GGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGC 162752 | |||| | || | ||||||||||| | || || |||||||| | | |||||||| Sbjct 26587470 GCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGT 26587411 Query 162753 GAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATG 162812 || ||||| || || || ||| || | || || | ||| |||| ||||| ||| Sbjct 26587410 GATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAAACTTATTCAATG 26587351 Query 162813 GTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGG 162872 |||||||| || ||||| ||||| || || || || |||||||| || || |||||| Sbjct 26587350 GTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCCAATAAACGTTGG 26587291 Query 162873 T 162873 | Sbjct 26587290 T 26587290 >seq8 Length=30791815 Score = 100 bits (110), Expect = 3e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 |||||||| || ||||| ||||| || || || ||||| ||||||||||||||| || Sbjct 23181330 TACATCCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGCCGTGCGGGA 23181271 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 ||||| || | ||||| || || | || ||||| | || || || || || Sbjct 23181270 GCTTGCTCTACTTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCA 23181211 Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCTACA 158520 ||||| || || ||||||| | || || | || || ||||| || ||||| || Sbjct 23181210 TTCCTTGATGACAACCAAATGAAGGAAGGCTTTCTACTTACCTGTGTCTCCTATCCAACT 23181151 Query 158521 AGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACTGTATTGA 158565 || ||||| ||||| ||| ||||||||| || || || ||| Sbjct 23181150 GCAGACTGTGTAATTGAAACTCACAAGGAAGGAGAGCTCTACTGA 23181106 >seq2 Length=35625406 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 ||||| || || |||||||||| || || || ||||| ||||| ||| | || || Sbjct 33288031 TACATTCTGGATTCAGCTGAGGATGCTGGAGTGGAACTACCATACTCATGCAGAGCTGGA 33287972 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 ||||| || | ||||| || ||||| | || || | || || || || || ||| Sbjct 33287971 GCTTGCTCTACTTGTGCAGGCAAACTGCTTTCAGGTGCTGTGGATCAGTCAGATCAATCC 33287912 Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCTACA 158520 ||||| || || | ||||| || |||| | |||| || ||||| || ||||| ||| Sbjct 33287911 TTCCTTGAAGAACAGCAAATGGAGAAAGGTTACCTTCTCACATGTGTCTCGTATCCGACA 33287852 Query 158521 AGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACT 158558 |||||||||||| | || ||||||| || || || Sbjct 33287851 TCAGATTGTGTGATTTACACCCACAAGGAGGAAGATCT 33287814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547491299355000