Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq37374 515 1e-141 seq6 226 8e-55 seq5 149 2e-31 seq456 91.5 4e-14 >seq37374 Length=151683 Score = 515 bits (570), Expect = 1e-141 Identities = 696/962 (72%), Gaps = 12/962 (1%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || || || || ||||| || || || || || |||||||| || || | |||||||| Sbjct 3330 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 3389 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 || ||||||| ||| ||||||||||| || || || | || | | | | | | ||| Sbjct 3390 GCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGGAT 3449 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGT--AGACACGCCAAGCGCAGCAA 21648 ||||| || || |||||||| |||||||||||||| || || || ||||| | || Sbjct 3450 TGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCG--GTAA 3507 Query 21649 ACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAA 21708 ||||||||||||| |||||||| ||||| || |||||||| | | ||| ||||| || | Sbjct 3508 ACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGA 3567 Query 21709 AGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAG 21768 | || |||||||||||||| | || |||||||| || |||||||| |||||||| |||| Sbjct 3568 AACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAG 3627 Query 21769 TCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCAC 21828 | ||||||||||||||||| ||||||| | || || | | ||| || || || | Sbjct 3628 TTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCC 3687 Query 21829 GAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATA 21888 || | || || |||| | ||| ||||||||| ||| | || || |||| Sbjct 3688 TGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATA 3747 Query 21889 CGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACA 21948 | || || ||||| | ||||||||| ||||||||||||||||| ||||||||||| || | Sbjct 3748 CACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATA 3807 Query 21949 CCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCT 22008 | | ||| | ||||| || || || || || | |||||| |||| ||||| || | Sbjct 3808 CAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTTCCTT 3867 Query 22009 GTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAA 22068 | |||| ||||| | | ||| |||||||| || || || |||||||| || || |||| Sbjct 3868 GACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAA 3927 Query 22069 CAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAG 22128 || ||||| || | ||| || || ||| | |||||||||||||| || ||||||| || Sbjct 3928 CAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGT-AG 3986 Query 22129 CAA-AGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGC 22187 ||| || |||| | |||||| | || | |||| | |||||||||||||| | | Sbjct 3987 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAAC 4046 Query 22188 CATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTG 22247 |||||||||| | ||| |||||||| || || || || || | || || || | Sbjct 4047 CATTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCAGAA 4106 Query 22248 CTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGT 22307 | |||| | || || || ||||| ||||| ||||| | || || |||| || || Sbjct 4107 GTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGC 4166 Query 22308 TCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAA---ACAA 22364 || || || ||||| || || || || || || | | ||| ||||||||||| | || Sbjct 4167 TCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGAA 4226 Query 22365 GTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGG 22424 |||| | | ||| | | | |||||||| | || || |||||||| | |||||||| Sbjct 4227 GTTGCA--GTCAATAAAGTA-GGAATCATCAAAACACCAAACCATCCAATGTAAAGACGA 4283 Query 22425 TT 22426 || Sbjct 4284 TT 4285 >seq6 Length=19356003 Score = 226 bits (250), Expect = 8e-55 Identities = 241/316 (76%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 21483 GGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGA 21542 || || || || || || || |||| ||| || || | |||||||| || ||||||| | Sbjct 3411189 GGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGTTAGCTCGGTTAATA 3411130 Query 21543 ATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGGTTAAAGTTG 21602 || ||||||||||| || || || | || | | | | | | |||||||| || || Sbjct 3411129 ATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAATTACGGATTGGTTGAAATTA 3411070 Query 21603 AAACCATTCAAGTTGAAAGCCATGGTA--GACACGCCAAGCGCAGCAAACCAAATACCTA 21660 |||||||| ||||||||| |||| || || || ||||| | |||||||||||||| Sbjct 3411069 AAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCG--GTAAACCAAATACCTA 3411012 Query 21661 CAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATT 21720 | | |||||| ||||| || |||||| | | | ||| ||||| || || || ||||||| Sbjct 3411011 CTATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAACGAGAATTGTTGAAACTTGCATATT 3410952 Query 21721 GGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTT 21780 ||||||| | || ||||||||| | |||||||| |||||||| ||||| ||||| |||| Sbjct 3410951 GGAAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATTATAAGTTTCTTCTTCTT 3410892 Query 21781 GACCAAACTTGTAACC 21796 ||||||| |||||||| Sbjct 3410891 GACCAAATTTGTAACC 3410876 >seq5 Length=30687117 Score = 149 bits (164), Expect = 2e-31 Identities = 123/150 (82%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 21647 AAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATT 21706 ||||||||||||||| |||||||| ||||| ||||||||||| | | ||| || |||| Sbjct 28538892 AAACCAAATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAAAACGAAAACTATT 28538833 Query 21707 AAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTA 21766 || || | |||||||||||| | || |||||||| || ||||||| ||||||| || Sbjct 28538832 GAAACTTGTATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGTTTCAATATTATA 28538773 Query 21767 AGTCTCTTCCTCTTGACCAAACTTGTAACC 21796 ||| ||||||||||||||||| ||||||| Sbjct 28538772 AGTTTCTTCCTCTTGACCAAATCTGTAACC 28538743 >seq456 Length=558995 Score = 91.5 bits (100), Expect = 4e-14 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 21650 CCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAA 21709 |||||||||||| |||||||| ||||| || |||||||| | | ||| ||||| || || Sbjct 484761 CCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 484702 Query 21710 GCTAGCATATTGGAAGATAAGCCGACCAAAATA 21742 || |||||||||||||| | || |||||||| Sbjct 484701 ACTTGCATATTGGAAGATCAATCGGCCAAAATA 484669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146143108777500