Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 125 9e-24 seq1 125 9e-24 seq182 111 2e-19 seq21 102 1e-16 seq25 91.5 2e-13 >seq3 Length=41204908 Score = 125 bits (138), Expect = 9e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||||||||||||||| | || ||||| || || |||||||||||||||||||| Sbjct 26200503 TCCTTCGCCGAGCGCCTCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAGC 26200444 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 || ||| | || | ||| | ||||| ||||| ||||||||||| || ||||| || Sbjct 26200443 TTTTGCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAAC 26200384 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCA 65216 ||||| || ||||| || ||||||||||| Sbjct 26200383 GAACTCATCTCCCGCGACGAGGGTCTCCA 26200355 Score = 111 bits (122), Expect = 2e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 |||||||||||||||||| | || || || || || ||||| |||||||||||||| Sbjct 34261176 CTCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAG 34261235 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 |||||| | || | |||| | |||||||| || | ||||| || || |||||| || Sbjct 34261236 CTTCTGCTCGATATTTTGGCTCAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAA 34261295 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||| || || |||||||| || || ||| Sbjct 34261296 CGAACTCATCTCGCGAGATGAAGGGCTTCAC 34261326 >seq1 Length=42234885 Score = 125 bits (138), Expect = 9e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 75129 GGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACGG 75187 |||||| ||| | || ||| |||||| ||||||||||||||| | ||| || | || || Sbjct 1929534 GGGACTTTGACTATGATTATTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTCTTAAAGG 1929593 Query 75188 CTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATC 75247 || | |||| | |||||| ||||| ||||||| ||| ||||||| | || || Sbjct 1929594 TTCAA-GGCAAGGTTGTGGAAAGACCACAACACATGTTGATGAGGGTCGCTGTTGGAATT 1929652 Query 75248 CACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTC 75307 || ||||||||||||| ||| | | || ||| || |||||| ||| | |||| Sbjct 1929653 CATAAGGAAGACATTGATGCTGCTGTCAAAACTTACCACCTGATGTCTCAACGGTGGTTC 1929712 Query 75308 ATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAG 75355 | ||| ||| | ||||| || ||||| || || ||||| ||||| ||| Sbjct 1929713 ACTCATGCATCTCCAACTCTTTTCAACGCGGGAACACCTAGACCACAG 1929760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/144 (74%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 75933 AGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATC 75992 |||| |||| |||| ||| || || ||| ||||| |||||||||||||| ||||| Sbjct 1930867 AGGACACTTGCAACAGGAAAAGCAATCAACAGAATCTGGGAACAATCAAGTCATCAAACT 1930926 Query 75993 TTTGCACGGAAATTTTAGAGTACACAGAT--AAGGATGAGACGGCTGTTTGCAATTTGGC 76050 | ||||| || || | ||||| ||| | || | || || ||||| ||||||||||| Sbjct 1930927 TGTGCACTGAGATAATTGAGTATACAAGTCCAACG--GAAACTGCTGTGTGCAATTTGGC 1930984 Query 76051 ATCAATCGCCCTTCCAAAGTATGT 76074 |||||| || || ||| ||||| Sbjct 1930985 ATCAATTGCTCTACCACGATATGT 1931008 >seq182 Length=1065506 Score = 111 bits (122), Expect = 2e-19 Identities = 303/460 (66%), Gaps = 8/460 (2%) Strand=Plus/Minus Query 175192 GATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAG 175251 ||||||| || | |||| |||||| | || || ||| | ||||| ||||| || Sbjct 180859 GATGTTGCTGGAGTGGACGAAGCCAAACAGGATTTTATGGAGGTGGTGGAATTTCTTAAA 180800 Query 175252 CAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGT 175311 | |||||||||| || ||| || || || ||| | ||||| | ||| Sbjct 180799 AAGCCCGAGAGATTCACTGCTGTTGGGGCTCGCATACCAAAAGGTGTTCTTCTTGTTGGT 180740 Query 175312 AAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCA 175371 || || || || ||||| || | || || || || |||||| || ||||||| Sbjct 180739 CCTCCTGGAACTGGGAAGACACTTTTAGCAAAGGCTATTGCAGGTGAAGCAGGTGTCCCA 180680 Query 175372 TTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAG 175430 || | || | ||| | | | ||||||||||||||||||||||| ||||| | Sbjct 180679 TTTTTTTCAAT-CTCAGGTTCTGAGTTTGTGGAGATGTTTGTTGGTGTTGGTGCTTCCCG 180621 Query 175431 GGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGA 175490 || |||||| | || | | ||| || ||| ||||| ||||| || ||||||| Sbjct 180620 AGTCCGCGATTTATTCAAGAAGGCCAAAGAGAATGCTCCATGCATTGTTTTTGTTGATGA 180561 Query 175491 GATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGAG 175547 |||||||| || || | |||| | | |||| |||| || ||||| || || Sbjct 180560 AATTGATGCTGTTGGAAGGCAAAGGGGTACTGGAATTGGT---GGAGGGAATGATGAAAG 180504 Query 175548 AGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCAT 175607 |||||| || | || ||||| | || || |||||||| ||||| | | || || || Sbjct 180503 AGAACAGACCCTCAACCAACTTTTGACAGAAATGGATGGATTTGAGGGTAATACGGGTAT 180444 Query 175608 TGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGAT 175647 | || ||||| || ||||| | | || || |||||| Sbjct 180443 CATTGTCATTGCAGCTACTAACAGGGCTGACATTCTTGAT 180404 >seq21 Length=722760 Score = 102 bits (112), Expect = 1e-16 Identities = 301/460 (65%), Gaps = 8/460 (2%) Strand=Plus/Plus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250 |||||||| ||| | || | ||||| | || || ||| | ||||| ||||| || Sbjct 270948 TGATGTTGCTGGGGTGGATGAAGCCAAGCAGGACTTTATGGAGGTGGTGGAGTTTCTGAA 271007 Query 175251 GCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGG 175310 | | || ||||| | || ||| || || || ||| | ||||| | || Sbjct 271008 GAAGCCTGAGAGGTTCACTGCTGTTGGGGCTCGCATACCTAAAGGAGTTCTTCTTGTTGG 271067 Query 175311 TAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCC 175370 | ||||| || || |||||||| | ||| || || || |||||| | ||| || Sbjct 271068 TCCTCCAGGAACTGGGAAGACCCTGTTGGCCAAGGCTATTGCTGGTGAAGCTGGTGTTCC 271127 Query 175371 ATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAA 175429 ||| | || | || | | | ||||| ||||||||||||||||| ||||| Sbjct 271128 ATTTTTTTCAATA-TCCGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCTC 271186 Query 175430 GGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATG 175489 | ||||| ||| | || | | ||| ||||| || || |||||||| |||||| Sbjct 271187 GAGTTCGTGATTTGTTCAAGAAGGCCAAAGAAAACGCCCCTTGCATTGTCTTTGTTGATG 271246 Query 175490 AGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGA 175546 | |||||||| || || | ||| | | |||| |||| || |||||| || | Sbjct 271247 AAATTGATGCTGTTGGAAGACAAAGAGGAACTGGAATTGGT---GGAGGAAATGATGAAA 271303 Query 175547 GAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCA 175606 |||| || || | || ||||| | || || |||||||| ||||| | | ||||||| Sbjct 271304 GAGAGCAGACCCTCAACCAACTTTTGACAGAAATGGATGGTTTTGAGGGTAATACTGGCA 271363 Query 175607 TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGA 175646 | | || ||||| || ||||| | | || || ||||| Sbjct 271364 TCATTGTCATTGCAGCAACTAACAGGGCAGACATTCTTGA 271403 >seq25 Length=312266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 75129 GGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACGG 75187 |||||| || | || ||| ||||| ||||||||||||||| | || || | || || Sbjct 241714 GGGACTTCGACTATGATTATTTTGGGTTCAAAACCCTTGAGAGGTCTTACCTCTTAAAGG 241773 Query 75188 CTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATC 75247 || | || | | |||||| || || ||||||| ||| | ||||| | || || Sbjct 241774 TTCAAGGGAAGGTTG-TGGAAAGGCCGCAACACATGTTGATGAGAGTCGCGGTTGGGATT 241832 Query 75248 CACGGGGAAGACATTGATTCTGTCTTGGAGA-CATACGACAAGATGTCCCAAGGTATGTT 75306 ||| ||| ||||| || |||| || ||| | ||| ||| |||||| ||| | ||| Sbjct 241833 CACAAGGATGACATAGAATCTG-CTGTCAGAACTTACCACATGATGTCTCAACGATGGTT 241891 Query 75307 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354 || |||||| | || || || ||||||||||| || || || || || Sbjct 241892 CACCCACGCATCTCCTACTCTTTTCAATGCTGGAACTCCTAGGCCTCA 241939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596290890140000