Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq37374 504 9e-138 seq6 223 4e-53 seq5 87.8 2e-12 >seq37374 Length=151683 Score = 504 bits (558), Expect = 9e-138 Identities = 684/952 (72%), Gaps = 4/952 (0%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| |||| ||||| || || ||||| | ||||||||| ||||||||||| | ||| Sbjct 3330 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 3389 Query 7951 GCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008 |||| ||| ||||| ||| |||| ||| || | ||| | | |||||| || | Sbjct 3390 GCTCGGTTAATAATA--TCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGG 3447 Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTA 8068 ||||||| || ||||| || || | ||| || ||||| |||| ||||| | || || | Sbjct 3448 ATTGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTAA 3507 Query 8069 ACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAA 8128 |||||| || ||| || || | | ||| |||||||| || | | | | ||||| | Sbjct 3508 ACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGA 3567 Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188 | |||||| |||||||| |||| ||||| || ||||||||||| ||||||||||| | Sbjct 3568 AACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAG 3627 Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248 | ||||| ||||||||||| | ||||| | || || || | ||| || || || | Sbjct 3628 TTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCC 3687 Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACA 8308 |||| | | ||| || || || ||||| |||||||||||||| || || || ||||| | Sbjct 3688 TGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATA 3747 Query 8309 TACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATA 8368 ||| ||||| ||| ||| || || |||||||||||||| |||||||| || || |||| Sbjct 3748 CACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATA 3807 Query 8369 CGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCT 8428 | | ||| || || || ||||||||||| ||||||||||| ||||| || || || | Sbjct 3808 CAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTTCCTT 3867 Query 8429 GACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTA 8488 |||||| ||||| | ||||| || || ||| || | || ||||| |||||| | Sbjct 3868 GACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAA 3927 Query 8489 CACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAG 8548 || ||||| || | |||||| | || | | ||||||| | ||||||||| Sbjct 3928 CAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAGC 3987 Query 8549 CAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACC 8608 || | |||| | |||||| | | || | | ||| ||||| ||||| || |||| Sbjct 3988 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACC 4047 Query 8609 ACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAG 8668 | ||||| | | || |||||||| || ||||| || || || || ||||| |||| Sbjct 4048 ATTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCAGAAG 4107 Query 8669 ATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTT 8728 |||| | |||||||| ||||| ||||||||||| | | || || | |||||| | Sbjct 4108 TAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCT 4167 Query 8729 CACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAG 8788 |||||||||| || ||||| || || || ||||| ||||| || | ||||| || || Sbjct 4168 CACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGAAG 4227 Query 8789 CAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAG 8840 |||| || || ||||||||| | ||| |||||||| || | ||||| Sbjct 4228 TTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAG 4279 >seq6 Length=19356003 Score = 223 bits (246), Expect = 4e-53 Identities = 311/432 (72%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 ||||| ||||| || || || || ||||| | ||||| ||| ||||||||||| | ||| Sbjct 3411201 GCTAAATCTAAAGGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGTTA 3411142 Query 7951 GCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008 |||| ||| ||||| ||| |||| ||| || | ||| | | ||||| || | Sbjct 3411141 GCTCGGTTAATAATA--TCAGCCCAGGTATTTATTACACGACCTTGACTATCAATTACGG 3411084 Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTA 8068 ||||||| || ||||| || || | ||| || |||| |||| ||||| | || || | Sbjct 3411083 ATTGGTTGAAATTAAAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCGGTAA 3411024 Query 8069 ACCAAACACATACAACTGGGAATGTAGCGAGGAAGAA--GTGAAGACTTCTACTGTTGTT 8126 |||||| || ||| | || | | ||| |||||||| || |||| | | ||||| Sbjct 3411023 ACCAAATACCTACTATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAA--CGAGAATTGTT 3410966 Query 8127 AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATA 8186 || |||||| |||||||| |||| ||||| || |||||||||| ||||||||||| Sbjct 3410965 GAAACTTGCATATTGGAAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATTATA 3410906 Query 8187 GGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTC 8246 || ||||||||||||||||| || ||||| | || | | || | ||| || || || Sbjct 3410905 AGTTTCTTCTTCTTGACCAAATTTGTAACCTTCATTTGCAAATTCATTTTCTGTGGTTTC 3410846 Query 8247 TCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAA 8306 || || | | ||| || || || ||||| | ||||| |||||| || || || ||||| Sbjct 3410845 CCTTATCAAACTAGAAGTTACCAAGGAACCATCCATAGTACTGAATAGGGAGCCGCCGAA 3410786 Query 8307 CATACCTGCTAC 8318 | ||| ||||| Sbjct 3410785 TACACCAGCTAC 3410774 >seq5 Length=30687117 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/155 (74%), Gaps = 6/155 (4%) Strand=Plus/Minus Query 8065 GTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTG---AAGACTTCTACTG 8121 || ||||||| || ||| || || | | ||| || ||||| || || || ||| Sbjct 28538894 GTAAACCAAATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAAAACGAAAACTA 28538835 Query 8122 TTGTTAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATA 8181 ||| |||| || ||| |||||||| |||| ||||| || |||||||||| ||||| Sbjct 28538834 TTG--AAACT-TGTATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGTTTCAATA 28538778 Query 8182 TTATAGGTCTCTTCTTCTTGACCAAACTTATAACC 8216 ||||| || ||||| ||||||||||| | ||||| Sbjct 28538777 TTATAAGTTTCTTCCTCTTGACCAAATCTGTAACC 28538743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615574676785000