Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq37374 612 2e-170 seq6 246 3e-60 seq9 185 1e-41 seq5 100 3e-16 seq2 96.9 4e-15 seq37375 91.5 2e-13 >seq37374 Length=151683 Score = 612 bits (678), Expect = 2e-170 Identities = 730/988 (74%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||| | ||| | |||||||| | || ||||| || | || ||||||||| | Sbjct 4313 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4254 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 ||||||||| ||| | ||| | |||||| |||| || || |||| || |||||||| | Sbjct 4253 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4195 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || ||||| || || |||| ||||| | ||||| |||| Sbjct 4194 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4135 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | ||||| |||||||| || |||| |||| || || ||| | || || ||||| | Sbjct 4134 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4075 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| || || |||| |||||| | || ||||| ||||||| |||| ||| Sbjct 4074 TATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 4015 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | |||||| | |||| | | |||||||||||||||||||||||| || | Sbjct 4014 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 3955 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 |||| ||||||||||| ||||| |||||| || ||||| || || || || || | || Sbjct 3954 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTG 3895 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | |||||| | |||||||| || || || |||| ||||| || |||| Sbjct 3894 CTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAA 3835 Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306 | || || || ||||| | ||| | || || || |||||||| |||||||| ||||||| Sbjct 3834 TTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 3775 Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366 | || || ||| | || || ||||| ||||| || ||| | || ||||||||||| | Sbjct 3774 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 3715 Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426 | ||||| |||||| | | | || || || || |||| |||||| || | | Sbjct 3714 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAG 3655 Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486 |||||| || || ||||| |||||||| || || || ||||| ||||||||||| || | Sbjct 3654 GTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 3595 Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546 | || |||||||||||||| || |||||||| || || || || || |||||||| | Sbjct 3594 GCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 3535 Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606 |||| |||||||| || || || ||||| ||||| | || || ||| ||||| |||| Sbjct 3534 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCA 3475 Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666 || | || ||||| || |||||||| ||| | ||||| |||| |||||||| | || | Sbjct 3474 ACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATA 3415 Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726 ||||||| ||| || ||||||| ||| || ||||||||||| |||||||| ||||| | Sbjct 3414 CCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATG 3355 Query 166727 CACACAACTTCCCCCTCGACCTCGCTGC 166754 | || || ||||| || || || ||||| Sbjct 3354 CTCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 506 bits (560), Expect = 2e-138 Identities = 729/1021 (71%), Gaps = 8/1021 (1%) Strand=Plus/Minus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | ||||||||| | ||||| ||||| |||||||| || ||||| || Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | || ||||| || ||| | || | || |||||| |||| || || || || Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGC--GTCCAGTTATCTTGAGGG-TGCGAACTTT 167190 || || ||||||||||| || | || || | |||| | || || ||| ||||| Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTC--TTATTTAGAAGGCTGC-AACTTC 30985 Query 167191 CTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATGG 167250 | || || |||||| ||||| || || | | | || ||||| | | || ||| Sbjct 30984 TTAACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGG 30925 Query 167251 GGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTTT 167310 ||||||||| | || || ||||| | | ||| || | || || || ||| ||||| Sbjct 30924 GGTCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTT 30865 Query 167311 GTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCT 167370 || || |||||||| || || | | || ||||||||| | || || |||||||||||| Sbjct 30864 GTTGCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCT 30805 Query 167371 CGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTT 167429 || ||| | | | || || || ||||| || || ||||| ||||| |||||||| || Sbjct 30804 CGATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTT 30746 Query 167430 CGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTT 167489 ||| || || ||| | ||||| || ||||| | ||||||||||| || || Sbjct 30745 TGTTTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTT 30686 Query 167490 CGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACACT 167549 || || || || || || |||||| ||||||| |||||||||| || || |||||| | Sbjct 30685 TGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATT 30626 Query 167550 GAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAAT 167609 || ||||||||||||||||| || || ||| | |||| | |||| | || | || || Sbjct 30625 AAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTAT 30566 Query 167610 CCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAA 167669 ||||||| || ||||| |||||||| | |||||||||||| ||||| || || Sbjct 30565 TCATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 30506 Query 167670 GGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTG 167729 || || | | || || | ||||| ||||||||||||||||| || || || || || Sbjct 30505 TGCTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTG 30446 Query 167730 GTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATT 167789 ||| || ||||| || ||||||| ||| ||||| ||| | ||||||||||||||||| Sbjct 30445 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 30386 Query 167790 CGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCT 167849 || || || | || | |||| | |||| | | ||| |||| || || | Sbjct 30385 TGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTT 30326 Query 167850 TCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAAC 167909 |||||||| || |||||||||||||| ||| | || ||||| ||||| || ||||| || Sbjct 30325 ACGTGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGAC 30266 Query 167910 TTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGA 167969 |||||| || ||||| || || | || |||||| |||| || ||| | ||| || || Sbjct 30265 TTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGA 30206 Query 167970 TCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATA 168029 ||| |||||||| ||| || | ||||| ||||| ||||| ||||| || ||||| || || Sbjct 30205 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTA 30146 Query 168030 A 168030 | Sbjct 30145 A 30145 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 |||| | |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 106924 TCCCGTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 106865 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 106864 GTTCGAATCCTACTTGGGGAG 106844 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 |||| | |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 126044 TCCCGTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 126103 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 126104 GTTCGAATCCTACTTGGGGAG 126124 >seq6 Length=19356003 Score = 246 bits (272), Expect = 3e-60 Identities = 304/416 (73%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 166324 GTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCT 166383 || ||||| ||||| || ||| | || ||| ||||| | || ||||| |||||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 166384 TCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAA 166443 | | | || || || || |||| |||| ||| | |||||||| || || ||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 166444 GAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAA 166503 ||||||||||| || || || ||||| ||||||| || || || || |||||||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 166504 TACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTC 166563 || || |||||||| || || || || | |||||||| ||||| |||||| | || Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 166564 GGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAAC 166623 || || ||||| ||||| | || || ||| |||| |||||| | || ||||| || Sbjct 3411014 GGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAAT 3411073 Query 166624 TTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTT 166683 |||||||| ||| | ||||| |||| |||||||| | || |||||||| ||| || || Sbjct 3411074 TTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATT 3411133 Query 166684 AACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCC 166739 ||||| ||| || ||||||||||| ||| |||| ||||| || || || || || Sbjct 3411134 AACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq9 Length=31747250 Score = 185 bits (204), Expect = 1e-41 Identities = 221/300 (74%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 167470 TGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAA 167529 ||||||||||| || || || || || || || || |||||| ||||||| ||||| Sbjct 26587590 TGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAA 26587531 Query 167530 GGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGT 167589 ||||| || || |||||| | || ||||||||||||||||| || || ||| | |||| Sbjct 26587530 GGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGC 26587471 Query 167590 GGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGT 167649 | |||| | || | || || ||||||| || ||||| |||||||| | |||||||||| Sbjct 26587470 GCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGT 26587411 Query 167650 GAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATG 167709 || ||||| || || || || | | || || | ||| | |||||||||||| Sbjct 26587410 GATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAAACTTATTCAATG 26587351 Query 167710 GTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGG 167769 ||||| || || || || ||||| || ||||| || ||||||| ||| ||||| ||| Sbjct 26587350 GTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCCAATAAACGTTGG 26587291 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||||||| Sbjct 5307262 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAAT 5307321 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 5307322 CCTACTTGGGGAG 5307334 >seq5 Length=30687117 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 166426 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 166485 ||||||| || || ||||| |||||||| || || || | | | ||||||||||| || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 166486 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 166545 || || |||||||||||||| | ||||| | | || | || || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 166546 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGC 166580 ||||| |||||||| || || || ||||| ||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 >seq2 Length=35625406 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 |||| | ||||||| |||||||| || ||||| ||||||||||||| || ||||||||| Sbjct 19229708 TCCCGTTGTTCCTCAATAGCTCAGTGGTAGAGCGATCGACTGTTAATTGACTGGTCGTAG 19229649 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 19229648 GTTCGAATCCTACTTGGGGAG 19229628 >seq37375 Length=404466 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||||||| Sbjct 141769 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAAT 141710 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 141709 CCTACTTGGGGAG 141697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560985791950000