Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq37374 515 1e-141 seq6 226 8e-55 seq5 149 2e-31 seq456 91.5 4e-14 >seq37374 Length=151683 Score = 515 bits (570), Expect = 1e-141 Identities = 696/962 (72%), Gaps = 12/962 (1%) Strand=Plus/Minus Query 41261 AACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTGCCGCTACA 41320 || |||||||| | |||||||| || || | |||||||| | | | ||| | | || Sbjct 4285 AATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCC-TACTTTATTGAC--TGCA 4229 Query 41321 ACTTGT---TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGA 41377 |||| | ||||||||||| ||| | | || || || || || || ||||| || || Sbjct 4228 ACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGT 4169 Query 41378 GAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCG 41437 || || || |||| || || | ||||| ||||| ||||| || || || | |||| Sbjct 4168 GAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCT 4109 Query 41438 AGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAA 41497 | | || || || | || || || || || |||||||| ||| | |||||||| Sbjct 4108 ACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAA 4049 Query 41498 TGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCT-T 41556 ||| | |||||||||||||| | |||| | || | |||||| | |||| || | Sbjct 4048 TGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 3989 Query 41557 TGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTT 41616 |||| ||||||| || |||||||||||||| | ||| || || ||| | || ||||| Sbjct 3988 TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGC 3930 Query 41617 TGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGG 41676 |||||| || || |||||||| || || || |||||||| ||| | | ||||| |||| Sbjct 3929 TGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGG 3870 Query 41677 ACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCT 41736 || || ||||| |||| |||||| | || || || || || ||||| | ||| | Sbjct 3869 TCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGAT 3810 Query 41737 GGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGG 41796 || || ||||||||||| ||||||||||||||||| ||||||||| | ||||| || || Sbjct 3809 TGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGG 3750 Query 41797 CGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCAT 41856 ||||| || || | ||| ||||||||| ||| | |||| || || | || Sbjct 3749 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGAT 3690 Query 41857 TCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGA 41916 | || || || ||| | | || || | ||||||| ||||||||||||||||| Sbjct 3689 CAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGA 3630 Query 41917 GACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAG 41976 ||||| |||||||| |||||||| || |||||||| || | |||||||||||||| || Sbjct 3629 AACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAG 3570 Query 41977 CTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTG 42036 || || ||||| ||| | | |||||||| || ||||| |||||||| ||||||||||| Sbjct 3569 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTG 3510 Query 42037 GTTTGCTGCGCTTGGCGTGTCT--ACCATGGCTTTCAACTTGAATGGTTTCAACTTTAAC 42094 |||| | ||||| || || || |||||||||||||| |||||||| || || ||| Sbjct 3509 GTTTAC--CGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAAC 3452 Query 42095 CAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGT 42154 ||||| | | | | | | || | || || || ||||||||||| ||| ||||||| Sbjct 3451 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGA 3392 Query 42155 GCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCTT 42214 || |||||||| | || || |||||||| || || || || || ||||| || || || Sbjct 3391 GCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTA 3332 Query 42215 GC 42216 || Sbjct 3331 GC 3330 >seq6 Length=19356003 Score = 226 bits (250), Expect = 8e-55 Identities = 241/316 (76%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 |||||||| ||||||||||| ||||| ||||| |||||||| |||||||| | ||||||| Sbjct 3410876 GGTTACAAATTTGGTCAAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTT 3410935 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || | |||||||||||||| || || || ||||| ||| | | | |||||| || Sbjct 3410936 GGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTA 3410995 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TACCATGGCTT 42068 ||||| |||||| | ||||||||||||||| | ||||| || || || |||| || Sbjct 3410996 GCTGCTTGGCCTATAGTAGGTATTTGGTTTAC--CGCTTTAGGTATCAGCACTATGGTTT 3411053 Query 42069 TCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCA 42128 ||||||| |||||||| || || |||||||| | | | | | | || | || || | Sbjct 3411054 TCAACTTAAATGGTTTTAATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAA 3411113 Query 42129 ACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGA 42188 | ||||||||||| ||| ||||||| || |||||||| | || || ||| |||| || | Sbjct 3411114 ATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTA 3411173 Query 42189 ACGCACACAACTTCCC 42204 | || || || || || Sbjct 3411174 ATGCTCATAATTTGCC 3411189 >seq5 Length=30687117 Score = 149 bits (164), Expect = 2e-31 Identities = 123/150 (82%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| ||||||||||||||||| ||||| ||||||| ||||||| || |||||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || | |||||||||||| | || || |||| || ||| | | ||||||||||| Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTT 42040 ||||| |||||||| ||||||||||||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTT 28538892 >seq456 Length=558995 Score = 91.5 bits (100), Expect = 4e-14 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 41945 TATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTC 42004 |||||||| || | |||||||||||||| || || || ||||| ||| | | |||||| Sbjct 484669 TATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTC 484728 Query 42005 TTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGG 42037 || || ||||| |||||||| |||||||||||| Sbjct 484729 TTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146149505937000