Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq37374 576 4e-160 seq6 206 8e-49 seq5 107 5e-19 >seq37374 Length=151683 Score = 576 bits (638), Expect = 4e-160 Identities = 725/993 (73%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||| ||| | || || | || |||||||| |||| |||||| Sbjct 4321 TGGGGTCGCTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTT 4262 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| |||||||||| | | | |||| || | ||| |||||| ||||||| || Sbjct 4261 GGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTC-TGTATTTATTATCGCTTTTAT 4203 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 ||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || || Sbjct 4202 CGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTA 4143 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 ||| ||||| ||||| |||||||| | | |||| | || || || | ||||| Sbjct 4142 TGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTT 4083 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 ||| |||| |||||||| | | |||| |||||| | ||||| ||||| |||||| | Sbjct 4082 TTATCCGATATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGA 4023 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638 || | || | |||||| | | ||| | | ||| |||| || || |||||||| Sbjct 4022 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 3963 Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698 | | || || || ||| | || ||||| |||||| || || || ||||| || || Sbjct 3962 TAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 3903 Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758 || ||||| || ||| | ||||||| |||| ||||| ||||| ||||| ||||| Sbjct 3902 CGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCC 3843 Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818 ||| || ||||| ||||| ||||| || ||| | || || |||||||| ||||| ||||| Sbjct 3842 TCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCT 3783 Query 42819 TATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGC 42878 ||||||||| || || ||| | ||||| || || ||||| || || || | ||| || Sbjct 3782 TATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGC 3723 Query 42879 TATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCA 42938 |||||||||| | || || ||| | | | | ||||| || ||||| ||| | Sbjct 3722 TATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGC 3663 Query 42939 AAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGG 42998 ||| | || |||| || ||||||||||| || |||||||| ||||| || || ||||| Sbjct 3662 TAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGG 3603 Query 42999 TTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTT 43058 ||| ||||| || | |||||||||||||| || || ||| ||| ||||| || || Sbjct 3602 TTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTT 3543 Query 43059 CTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTAT 43118 ||| || || |||||||| || || || |||||||| || || | || |||| ||||| Sbjct 3542 CTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTAT 3483 Query 43119 GGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGT 43178 ||| || ||||| ||||||||||| || |||||||| | ||||||| ||| || ||| Sbjct 3482 GGCTTTCAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGT 3423 Query 43179 CATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGA 43238 || ||| |||||||||||| | || || || |||||||| | || || ||||| || Sbjct 3422 AATAAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGA 3363 Query 43239 GCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || ||||| ||||| ||||| || ||||| || Sbjct 3362 ACGTAATGCTCATAATTTCCCTCTAGATCTAGC 3330 >seq6 Length=19356003 Score = 206 bits (228), Expect = 8e-49 Identities = 296/417 (71%), Gaps = 0/417 (0%) Strand=Plus/Plus Query 42843 TGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTC 42902 ||| || || ||||| || || || | ||| ||||| ||||| | || || || Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 42903 TTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCA 42962 | | | | | ||||| || ||||| ||| |||| | || ||||| || ||||| Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 42963 AGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCA 43022 ||| || || |||||||| ||||| || || |||| || ||||| || | |||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 43023 ATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGT 43082 |||||| || || ||| ||| ||||| | ||||| || || |||||||| | || Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 43083 GGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAA 43142 || |||||||| || || | || |||| ||||||| || ||||| ||||||||||| Sbjct 3411013 AGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAA 3411072 Query 43143 CTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTT 43202 || |||||||| | |||||| ||| || ||| || ||| |||||||||||| | Sbjct 3411073 TTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTAT 3411132 Query 43203 GAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCC 43259 || || || |||||||| | || || ||| | || || ||||| ||||| || || Sbjct 3411133 TAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq5 Length=30687117 Score = 107 bits (118), Expect = 5e-19 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 42946 GGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTT 43005 || |||| || ||||||||||| || |||||||| |||| | || |||||||| ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 43006 GGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTT 43065 || || | |||||||||||| | || |||| | ||| | ||| || |||||||| Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 43066 GCCGCTTGGCCCGTTGTGGGGATTTGGTTCAC 43097 || |||||||| || || || |||||||| || Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTAC 28538894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143469096106500