Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq37374 480 2e-131 seq6 203 1e-47 seq5 91.5 4e-14 >seq37374 Length=151683 Score = 480 bits (532), Expect = 2e-131 Identities = 702/986 (71%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| || || || || |||||||||||||| || ||||| ||||| | || |||||| Sbjct 3330 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGGTTA 3389 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 |||||||| | | ||||||||| ||| ||||| || | | ||| ||||| || Sbjct 3390 GCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACGGAT 3449 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || ||||||||||||| ||| || ||||| |||| |||||| | || || | | Sbjct 3450 TGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTAAAC 3509 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| || |||||||| | |||||| || || ||| Sbjct 3510 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 3569 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || ||||| ||||||||||| || Sbjct 3570 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 3629 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| ||||| | || || | ||| || | | ||||| ||||| Sbjct 3630 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCCTG 3689 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | ||||| ||||| || ||||||||| ||| || | || ||||| || Sbjct 3690 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 3749 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 ||||| ||||| ||| || ||||| ||||| || |||||||| || || || ||||| Sbjct 3750 CCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACA 3809 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | |||||| || ||||||||||| || || |||||||| ||||| ||| || ||||| Sbjct 3810 ATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTTCCTTGA 3869 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 || | |||||| | ||||| || || ||| || | | || |||| |||||||||| Sbjct 3870 CCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACA 3929 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATAT-GC 26535 ||||| || | ||| || || | || |||||||||| | || ||| | || Sbjct 3930 GCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACC--CATGTAGC 3987 Query 26536 -TGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCC 26594 ||||| || | ||||||||| | | ||| |||| ||| || ||||| ||||||| || Sbjct 3988 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACC 4047 Query 26595 ACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGG 26654 | || || | | | |||||||| ||||| |||||||| | || || || ||| | Sbjct 4048 ATTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCAGAAG 4107 Query 26655 AGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCT 26714 || | | || || || || ||||||||||| || | || || || ||||| |||| Sbjct 4108 TAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCT 4167 Query 26715 CACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTA 26773 |||| || ||||| |||||||| || || || ||||| || || | ||||| ||| | | Sbjct 4168 CACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACA-GAA 4226 Query 26774 GTGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTC 26833 || || | | ||| || ||||| | || || |||||||| | || ||||| || Sbjct 4227 GTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATTT 4286 Query 26834 TCAGTACTTGTAACCCACTCACAAAA 26859 || || || || | ||| | ||| || Sbjct 4287 TCGGTGCTGGTTATCCAATTACAGAA 4312 >seq6 Length=19356003 Score = 203 bits (224), Expect = 1e-47 Identities = 305/432 (71%), Gaps = 6/432 (1%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 ||||| || | || || |||||||||||||| || | ||| ||||| | || |||||| Sbjct 3411201 GCTAAATCTAAAGGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGTTA 3411142 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 |||||||| | | ||||||||| ||| ||||| || | | ||| | ||| || Sbjct 3411141 GCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAATTACGGAT 3411082 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || ||||||||||||| ||| || |||| |||| |||||| | || || | | Sbjct 3411081 TGGTTGAAATTAAAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCGGTAAAC 3411022 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || | ||||||| ||| || |||||| | | |||||| || || ||| Sbjct 3411021 CAAATACCTACTATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAACGAGAATTGTTGAAA 3410962 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || | || ||||| ||||||||||| || Sbjct 3410961 CTTGCATATTGGAAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATTATAAGTT 3410902 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTC---CTCTGTCGTTTCT 26233 ||||| ||||| ||||| || || || | ||| || | ||| ||||| ||||| Sbjct 3410901 TCTTCTTCTTGACCAAATTTGTAACCTTCATT---TGCAAATTCATTTTCTGTGGTTTCC 3410845 Query 26234 GCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAA 26293 || | ||||| ||||| || | ||||| | ||| || | || ||||| Sbjct 3410844 CTTATCAAACTAGAAGTTACCAAGGAACCATCCATAGTACTGAATAGGGAGCCGCCGAAT 3410785 Query 26294 ACCCCAGCAACA 26305 || ||||| ||| Sbjct 3410784 ACACCAGCTACA 3410773 >seq5 Length=30687117 Score = 91.5 bits (100), Expect = 4e-14 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115 ||| || || || || ||||||| ||| ||||||||||| | | |||| |||| || Sbjct 28538889 CCAAATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAAAACGAAAACTATTGAA 28538830 Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175 ||| | ||| || || || |||| ||||| || || || |||| |||||||||| || Sbjct 28538829 ACTTGTATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGTTTCAATATTATAAGT 28538770 Query 26176 CTCTTCATCTTGCCCAAA 26193 ||||| ||||| ||||| Sbjct 28538769 TTCTTCCTCTTGACCAAA 28538752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147646441260000