Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq37374 527 7e-145 seq6 212 7e-50 >seq37374 Length=151683 Score = 527 bits (584), Expect = 7e-145 Identities = 686/947 (72%), Gaps = 6/947 (1%) Strand=Plus/Minus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||| ||| | | |||| || | || ||| || Sbjct 4270 GGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTATC 4211 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 || || || ||||| ||||| ||||| ||||||||||||||||| || || |||| ||| Sbjct 4210 GCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCT 4151 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 || | ||||| ||||| ||||| |||||||| || | |||| ||| || || ||| Sbjct 4150 CTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGT 4091 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | || || ||||| || ||||||||||| || ||||||| ||||| ||||| || ||| Sbjct 4090 TTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGT 4031 Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 155310 |||| |||| | || | |||||| | | || | | ||| |||||| || Sbjct 4030 CCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAG 3971 Query 155311 TGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 155370 ||||||||| || ||||| || |||||||||||||| ||||||||| || || || Sbjct 3970 TGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCT 3911 Query 155371 GTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGAT 155430 || | || || ||||| ||| | | |||||| | |||||||| || || ||| Sbjct 3910 GTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGAT 3851 Query 155431 GCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACAC 155490 | |||||||| || || ||||||||||| || | |||| | || || || || || || Sbjct 3850 GGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCAT 3791 Query 155491 AATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTT 155550 ||||| |||||||| || || |||||| | || ||||| ||||| ||||| || || || Sbjct 3790 AATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 3731 Query 155551 TTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAA 155610 ||| ||||||||| ||||| ||||| || ||| | ||| | ||||| || || | Sbjct 3730 TTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 3671 Query 155611 GAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCT 155670 || || || | ||||||| || || ||||| |||||||||||||| ||||| ||| Sbjct 3670 GAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCT 3611 Query 155671 GCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGT 155730 |||||||| || || || || | |||||||| |||||| |||||||| || | | Sbjct 3610 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCT 3551 Query 155731 CTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTG 155790 | || |||||||| ||||| |||||||| || | || ||| || ||| | ||| | Sbjct 3550 TTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATC 3491 Query 155791 TCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT 155850 || ||||| |||||| | || ||||| || |||||||| || ||||| || |||| Sbjct 3490 AGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGA---TAGT 3434 Query 155851 ---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAA 155907 ||| || || ||| ||||| || ||| ||||||| ||| |||||||||||| Sbjct 3433 CAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAA 3374 Query 155908 GTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGC 155954 |||||||| || ||||| ||||| || |||||||| || || ||||| Sbjct 3373 GTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGC 3327 >seq6 Length=19356003 Score = 212 bits (234), Expect = 7e-50 Identities = 310/435 (71%), Gaps = 10/435 (2%) Strand=Plus/Plus Query 155524 GTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCT 155583 ||||| ||||| ||||| || || || ||| | ||||| | ||||| ||||| || ||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 155584 TCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAA 155643 | || | ||||| || || | || | | || | |||||||| || || ||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 155644 GAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAG 155703 ||||||||||||||||| ||||| |||||||||| || || || || | |||||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 155704 TATGCATCCTTCAACAACTCAAGAAGTCTTCAC--TTCTTCCTTGCTGCATGGCCTGTGG 155761 |||||| |||||||| || | |||| || |||||||| ||||| |||||| | | Sbjct 3410954 TATGCAAGTTTCAACAATTCTCG--TTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 155762 TCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCA 155821 | | || ||| || ||| | ||| | || |||| |||||| | || ||||| | Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 155822 ACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACA 155878 | |||||||| || ||| | || |||| ||| || || ||| ||||| || | Sbjct 3411072 ATTTCAACCAATCCGTAATTGA---TAGTCAAGGTCGTGTAATAAATACCTGGGCTGATA 3411128 Query 155879 TTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCC 155938 || ||||||| ||| |||||||||||||||||| | || ||||| ||||| || || | Sbjct 3411129 TTATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGC 3411188 Query 155939 CTCTTGACCTTGCTG 155953 || | || | |||| Sbjct 3411189 CTTTAGATTTAGCTG 3411203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584561972305000