Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq37374 533 2e-146 seq6 212 7e-50 seq5 82.4 9e-11 >seq37374 Length=151683 Score = 533 bits (590), Expect = 2e-146 Identities = 698/965 (72%), Gaps = 6/965 (1%) Strand=Plus/Plus Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGT 67418 ||||| || || |||||||| || ||||| ||||| || ||||| |||||||| ||||| Sbjct 3327 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 3386 Query 67419 CCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAACG 67475 |||| ||||| || || ||||| ||| || || || |||| ||||| Sbjct 3387 TTAGCTCGGTTAATAATATCAGCCCAGGTATTTATTAC---ACGACCTTGACTATCAACT 3443 Query 67476 ACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCA 67535 |||||||||||||| || ||||| || | |||||| |||||||| | ||| | || Sbjct 3444 ACGGATTGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCG 3503 Query 67536 GTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTG 67595 || ||||| || | || ||||| | ||||| |||||||| || | | | || ||| Sbjct 3504 GTAAACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTG 3563 Query 67596 TTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTG 67655 |||||| |||||| ||||||||||| || || || || ||||||||||| ||||| || Sbjct 3564 TTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTA 3623 Query 67656 TAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTT 67715 ||||| ||||| ||||| || || ||||||| | || || || | || || ||| Sbjct 3624 TAAGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTT 3683 Query 67716 TCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCG 67775 || ||||| | | |||||| || | ||||| ||||||||||| || || || || ||| Sbjct 3684 TCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCG 3743 Query 67776 AATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGG 67835 |||||||| ||||| || | ||| || ||||| |||||||| || || ||||| || || Sbjct 3744 AATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGA 3803 Query 67836 AACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAA 67895 || || | ||| | || |||||||||||||| || |||||||| | || || || Sbjct 3804 AATACAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTT 3863 Query 67896 CCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTAT 67955 |||||||| | |||||||| |||||| ||||| || || | || ||||| || ||| Sbjct 3864 CCTTGACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATAT 3923 Query 67956 GCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAG 68015 || ||| ||||||||||||||||| ||||| || ||||||||||| |||||| | Sbjct 3924 GCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATG 3983 Query 68016 TATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATAC 68075 || | | || | | |||||| | || | |||| |||| || || || || Sbjct 3984 TAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTAT 4043 Query 68076 AACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTT 68135 ||||| ||||| | || ||||||||||| || ||||| || || | ||| || || Sbjct 4044 AACCATTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCA 4103 Query 68136 GAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACA 68195 ||| |||||| || |||||||||||||| ||||| || || | || || || | |||| Sbjct 4104 GAAGTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACA 4163 Query 68196 GGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAA 68255 || || | |||||||| ||||| |||||||| || || || || || || || || | Sbjct 4164 GGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACA 4223 Query 68256 GTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGA 68315 | | ||| | | || |||||||||||| ||||| ||||| |||| || | ||| Sbjct 4224 GAAGTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGA 4283 Query 68316 TTGTC 68320 || || Sbjct 4284 TTTTC 4288 >seq6 Length=19356003 Score = 212 bits (234), Expect = 7e-50 Identities = 310/435 (71%), Gaps = 10/435 (2%) Strand=Plus/Minus Query 67360 CAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTC 67419 |||| | || | ||| || || ||||| ||||| || | ||| |||||||| ||||| Sbjct 3411203 CAGCTAAATCTAAAGGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGT 3411144 Query 67420 CTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAACGA 67476 |||| ||||| || || ||||| ||| || || || |||| |||| | Sbjct 3411143 TAGCTCGGTTAATAATATCAGCCCAGGTATTTATTAC---ACGACCTTGACTATCAATTA 3411087 Query 67477 CGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAG 67536 ||||||||||||| || ||||| || | |||||| ||||||| | ||| | || | Sbjct 3411086 CGGATTGGTTGAAATTAAAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCGG 3411027 Query 67537 TGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAA--GTGAAGACTTCTTGAGTT 67594 | ||||| || | || | ||| | ||||| |||||||| || |||| | || || Sbjct 3411026 TAAACCAAATACCTACTATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAA--CGAGAATT 3410969 Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654 ||||||| |||||| ||||||||||| || || || || |||||||||| ||||| || Sbjct 3410968 GTTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATT 3410909 Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714 ||||| ||||||||||| || || |||||||| | || | || | || || || Sbjct 3410908 ATAAGTTTCTTCTTCTTGACCAAATTTGTAACCTTCATTTGCAAATTCATTTTCTGTGGT 3410849 Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774 ||| || || | | |||||| || | ||||| | ||||| ||| || || || || || Sbjct 3410848 TTCCCTTATCAAACTAGAAGTTACCAAGGAACCATCCATAGTACTGAATAGGGAGCCGCC 3410789 Query 67775 GAATACACCTGCTAC 67789 ||||||||| ||||| Sbjct 3410788 GAATACACCAGCTAC 3410774 >seq5 Length=30687117 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 67533 GCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAG 67592 || || ||||| || | || ||||| | ||||| || ||||| || | | | | Sbjct 28538897 GCGGTAAACCAAATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAAAACGAAAA 28538838 Query 67593 TTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATG 67652 | |||||| || ||| ||||||||||| || || || || |||||||||| |||| Sbjct 28538837 CTATTGAAACTTGTATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGTTTCAATA 28538778 Query 67653 TTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACC 67687 || ||||| ||||| ||||| || || ||||||| Sbjct 28538777 TTATAAGTTTCTTCCTCTTGACCAAATCTGTAACC 28538743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566682329355000