Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq37374 645 4e-180 seq6 253 2e-62 seq9 217 2e-51 seq2 95.1 1e-14 seq37375 89.7 6e-13 >seq37374 Length=151683 Score = 645 bits (714), Expect = 4e-180 Identities = 727/968 (75%), Gaps = 4/968 (0%) Strand=Plus/Plus Query 67840 GCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAA 67899 ||||| || || |||||||| || || || ||||| |||||||| ||||||||||| | Sbjct 3327 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 3386 Query 67900 CCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATA 67959 ||| ||||| | || || ||||||||| | || ||| |||||||| | Sbjct 3387 TTAGCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAACTACG 3446 Query 67960 GACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTG 68019 || |||||||| || |||||||| | |||||| ||||| ||||| | ||| | || || Sbjct 3447 GATTGGTTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTA 3506 Query 68020 AACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTG 68079 ||||| ||||| || |||||||| ||||| |||||||| || | ||||| || |||||| Sbjct 3507 AACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTG 3566 Query 68080 AACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAA 68139 || |||||| |||||||||| || || || || ||||| ||||| ||||| || ||| Sbjct 3567 AAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAA 3626 Query 68140 GTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCA 68199 || ||||| |||||||| || ||||||| | || ||| ||| |||| |||||||| Sbjct 3627 GTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCC 3686 Query 68200 CGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAAT 68259 | | || |||||| |||| |||||||||||| |||||||| || || || || ||| Sbjct 3687 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 3746 Query 68260 ACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAC 68319 || ||||| || || | ||| || || || ||||| || || || ||||| || || || Sbjct 3747 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAAT 3806 Query 68320 ACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCT 68379 || | ||| | ||||||||||||||||| || |||||||| | || || || ||| Sbjct 3807 ACAATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCCGAAAAGCTTCCT 3866 Query 68380 TGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCA 68439 ||||| | |||||||| || ||| || || | || ||||||||||| || || |||||| Sbjct 3867 TGACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCA 3926 Query 68440 ACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTAT 68499 ||| ||||||||||||||||| |||||| | ||||||||| ||||| |||||||| Sbjct 3927 ACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA- 3985 Query 68500 GCAA-AGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAA 68558 |||| | ||||| | |||||| | | | |||| ||||||| || ||||| || Sbjct 3986 GCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAA 4045 Query 68559 CCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGA 68618 ||| ||||||| | ||||||||||| || |||||||| || | ||| || || || Sbjct 4046 CCATTCATCAACAGAAGCTGCTTCCCATATCGGATAAAAATGCAAACCTATAGCCGCAGA 4105 Query 68619 ACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGG 68678 | |||||| || |||||||||||||| ||||| ||||| || || || |||| |||||| Sbjct 4106 AGTAGGAATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGG 4165 Query 68679 TTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGA 68737 |||||||||||||| || || || || || |||||||| || |||| || || ||||| Sbjct 4166 CTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA 4225 Query 68738 TGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGT 68797 ||||| | | | ||||| ||||||| || || ||||| |||| |||||| || | Sbjct 4226 -AGTTGCAGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGAT 4284 Query 68798 TCTCTGTG 68805 | || ||| Sbjct 4285 TTTCGGTG 4292 Score = 590 bits (654), Expect = 7e-164 Identities = 739/1008 (73%), Gaps = 4/1008 (0%) Strand=Plus/Plus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || ||||| || || ||||||| || ||||||||| || | Sbjct 30144 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 30203 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||| ||||||| |||||| || || ||||| || || ||||||| Sbjct 30204 GATCTTGAGCTGCCATCCACGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 30263 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||| ||||| | ||| ||||| || || ||||||||||||| Sbjct 30264 AAGTCTCAAATTCAGGATCTTCCGCTGCGCGGATTTCTTGAGAAACGAAGTCATAAGCAC 30323 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | | ||| || || | ||| | | || | | ||| |||| | ||| | || || | Sbjct 30324 GTAAGTTCAGGGCCAAACCGACTACCCCAAGAGCACTCATCCATAAACCAGTTACTGGTA 30383 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| |||||||||||||| ||||| | |||||| ||| |||| |||||||| || | Sbjct 30384 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 30443 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 |||| ||||| || |||||||||||||| ||||||||||| |||| || | || || | Sbjct 30444 ACCAAAAGCGATTAGCAGTAACCATTGAATAAGTTTCTTCAGCTTGGGTTGGGTTAAAAG 30503 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||| || ||||| |||||||||||| | | |||||| ||||| || |||||| Sbjct 30504 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTTGCACCAT 30563 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 |||| || | || | |||| | |||| | ||| || || |||||||||||||| |||| Sbjct 30564 GAATAGCGCATAGTAGTGCAGCGCCCAATACACCAGCAACTCCCATCATATGAAATGGGT 30623 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 | || ||||| ||||| |||||||| | ||||| | ||||||||| || |||| || | Sbjct 30624 TTAATGTCCAATTATGAAATCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACAC 30683 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 | ||| ||||| || ||||||| || |||||||| || || || ||||| ||| || Sbjct 30684 CAAAACTAGGAGCAAAGAACCAACCAGACTGACCCAGTGGATAAATAAGAAATACAGAAA 30743 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA- 67244 |||||||||| || ||||| ||||| || || ||||| || || || | | || ||| Sbjct 30744 CAAAAACAGCAATTGGACCTGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGAT 30802 Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304 || || |||||||| || || | ||||||||| |||| ||||||| |||||||| || Sbjct 30803 CGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAATCCGAAAGCACCGTGGAGAGCA 30862 Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364 |||||| |||| || || || | || ||| ||| ||||| ||||| | |||||| Sbjct 30863 ACAAAAGTCCACAGACCACCTAACTGACACCAACGGGTAAAATCTCCCTGTGCTTCAGGA 30922 Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTG 67424 ||||| |||| | | ||| || | | | || ||| || || || || || || || Sbjct 30923 CCCCACAGTAACAACAAAGAGTGTGCTAAACTATTAGCGGGAGTGGAAACTGCAGCGGTT 30982 Query 67425 AGAAAATTAGCA-CCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGAC 67483 | | || | ||| || || | |||| | || | |||||||| ||||| || || Sbjct 30983 A-AGAAGTTGCAGCCTTCTAAATAAGAACTTGCCAAGCCGTGAGTATACCATGAAGTTAC 31041 Query 67484 AAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAG 67543 ||| || ||||| |||| ||| || || | || | ||| || ||||| || | ||| Sbjct 31042 AAAGGTCGTACCTGTAAACCAACCCCCCAAGGCGAAATAGGCGCAAGGAAAGAGTAATAG 31101 Query 67544 TCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591 || |||||||||||||| || || || || | | ||||||||| Sbjct 31102 ACCGGACCAACCCACAAAAACGAAACGGTCCCTCCGCAACCAGTCATC 31149 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||| ||||||||||||| || ||||||| ||| ||||| || ||| Sbjct 106844 CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 106903 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 106904 AGCTACTGAGGA 106915 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||| ||||||||||||| || ||||||| ||| ||||| || ||| Sbjct 126124 CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 126065 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 126064 AGCTACTGAGGA 126053 >seq6 Length=19356003 Score = 253 bits (280), Expect = 2e-62 Identities = 314/430 (73%), Gaps = 0/430 (0%) Strand=Plus/Minus Query 67841 CAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAAC 67900 |||| | || | ||| || || || || ||||| |||| ||| ||||||||||| | Sbjct 3411203 CAGCTAAATCTAAAGGCAAATTATGAGCATTACGTTCATACATTACTTCCATACCAAGGT 3411144 Query 67901 CAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAG 67960 ||| ||||| | || || ||||||||| | || ||| |||||||| | | Sbjct 3411143 TAGCTCGGTTAATAATATCAGCCCAGGTATTTATTACACGACCTTGACTATCAATTACGG 3411084 Query 67961 ACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGA 68020 | |||||||| || |||||||| | |||||| |||| ||||| | ||| | || || | Sbjct 3411083 ATTGGTTGAAATTAAAACCATTTAAGTTGAAAACCATAGTGCTGATACCTAAAGCGGTAA 3411024 Query 68021 ACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGA 68080 |||| ||||| || | |||||| ||||| |||||||| | | ||||| || ||||||| Sbjct 3411023 ACCAAATACCTACTATAGGCCAAGCAGCTAGGAAGAAACGTAAAGAACGAGAATTGTTGA 3410964 Query 68081 ACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAG 68140 | |||||| |||||||||| || || || || |||| ||||| ||||| || |||| Sbjct 3410963 AACTTGCATATTGGAAGATCAATCGGCCAAAATAGTCATGAGCAGCTACAATATTATAAG 3410904 Query 68141 TCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCAC 68200 | |||||||||||||| || |||||||| | || | ||| |||| |||||||| | Sbjct 3410903 TTTCTTCTTCTTGACCAAATTTGTAACCTTCATTTGCAAATTCATTTTCTGTGGTTTCCC 3410844 Query 68201 GAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATA 68260 | || |||||| |||| |||||||| ||| | |||||| || || || || |||| Sbjct 3410843 TTATCAAACTAGAAGTTACCAAGGAACCATCCATAGTACTGAATAGGGAGCCGCCGAATA 3410784 Query 68261 CGCCAGCAAC 68270 | ||||| || Sbjct 3410783 CACCAGCTAC 3410774 >seq9 Length=31747250 Score = 217 bits (240), Expect = 2e-51 Identities = 236/313 (75%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 66847 ACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAA 66906 |||| | |||||| ||| |||| |||||||| || ||||| ||||| || ||||||| Sbjct 26587290 ACCAACGTTTATTGGAAAAAGCAAACCCAAAGATTTGGGACCAAAAGCGATTAGCAGTAA 26587349 Query 66907 CCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTTGTT 66966 ||||||| ||||||| ||| |||| || | || || || ||| || ||||| | Sbjct 26587350 CCATTGAATAAGTTTTTTCAGCTTGGGTTGGGTTAAAAGCACAGAATGTATTTGCACCAT 26587409 Query 66967 CACCATCTTCATACAGAGTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATGCAC 67026 ||||||||||| | | |||||| ||||| || |||||||||| || | || | |||| Sbjct 26587410 CACCATCTTCAAATAAAGTATTTTCTACGGTTGCACCATGAATAGCGCATAGTAGTGCAG 26587469 Query 67027 CACCCAGGATACCTGCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGAATC 67086 | |||| | ||| || || |||||||||||||| ||||| || ||||| ||||| |||| Sbjct 26587470 CGCCCAATACACCAGCAACTCCCATCATATGAAATGGGTTTAATGTCCAATTATGAAATC 26587529 Query 67087 CTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAAACC 67146 |||| | ||||| | ||||||||| || |||| || || ||| ||||| || |||| Sbjct 26587530 CTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAACTAGGAGCAAAGAACC 26587589 Query 67147 AACTCGATTGACC 67159 ||| || ||||| Sbjct 26587590 AACCAGACTGACC 26587602 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||||||||||||||||| || ||||||| ||| ||||| || ||| Sbjct 5307334 CTCCCCAAGTAGGATTTGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 5307275 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 5307274 AGCTACTGAGGA 5307263 >seq2 Length=35625406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||| ||||||||||||| || ||||||||||||| ||||| || ||| Sbjct 19229628 CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAATTAACAGTCGATCGCTCTACCACTG 19229687 Query 35571 AGCTACTGAGGA 35582 ||||| |||||| Sbjct 19229688 AGCTATTGAGGA 19229699 >seq37375 Length=404466 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||||||||||||||||| || ||||||| ||| ||||| || ||| Sbjct 141697 CTCCCCAAGTAGGATTTGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 141756 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 141757 AGCTACTGAGGA 141768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571787143335000