Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 >seq1 Length=42234885 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||| ||||| |||| |||| || | ||| || |||||| Sbjct 37712643 AATTTGCATACCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATT 37712702 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | | || || ||| || | |||||| || || ||||| | ||||| || Sbjct 37712703 GTAATCAGCAAGGGTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTG 37712762 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| ||||| ||||| ||||| || |||| || | ||| ||| ||||| || Sbjct 37712763 ATCAGGAGGGATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGA 37712822 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || | ||||| ||||| || || | || |||||||| || ||||| Sbjct 37712823 ACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 37712879 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||| | || ||||| | || | ||||| ||| ||||| || Sbjct 6125982 ATACCACCACGGAGTCGCAAGACAAGATGGAGAGTTGATTCTTTCTGAATGTTATAATCT 6126041 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || |||| ||| |||| ||| ||||||||||| || | ||||| || || || Sbjct 6126042 GCCAAGGTTCGGCCATCTTCTAGTTGCTTTCCGGCAAATATGAGCCTCTGCTGGTCTGGT 6126101 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || ||||| || |||| || | ||| ||||| || || || Sbjct 6126102 GGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACATTGTCTATAGTGTCAGAGCTTTCG 6126161 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || || || || || || || || || ||||| ||||||||| Sbjct 6126162 ACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATTTGCATT 6126212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899234092710000