Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 6e-14 >seq1 Length=42234885 Score = 93.3 bits (102), Expect = 6e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || ||||||||||| || ||||| || || || ||| || Sbjct 37706947 AATGCAAATTTTTGTAAAGACGTTGACTGGAAAGACCATTACTTTGGAGGTTGAAAGCTC 37706888 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| ||| || || || || || || || ||||| || || || ||||| || Sbjct 37706887 TGATACCATTGATAATGTAAAGGCAAAGATTCAGGACAAAGAGGGGATTCCACCAGACCA 37706828 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||||| | || | ||| || |||||||| |||||| |||| | | |||||||| Sbjct 37706827 GCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAA 37706768 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037 || || || | || || || || ||||| || Sbjct 37706767 CATCCAGAAGGAATCTACTCTGCACTTGGTGTTGAG 37706732 Score = 89.7 bits (98), Expect = 8e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || | ||||||||||| ||||| || || || || ||| Sbjct 6125983 ATGCAGATTTTCGTCAAGACCCTTACTGGAAAAACAATTACTTTGGAGGTGGAGAGTTCA 6125924 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || ||||| || || || ||||| |||||||| || Sbjct 6125923 GACACGATTGACAATGTCAAGGCCAAGATACAGGACAAGGAGGGCATTCCTCCAGACCAG 6125864 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| ||||||| ||| || |||||||| || ||| | ||| | | |||||||| Sbjct 6125863 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACTCTGGCTGATTATAAC 6125804 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || || ||| | || |||||| Sbjct 6125803 ATTCAGAAGGAGTCCACTCTTCAT 6125780 Score = 87.8 bits (96), Expect = 3e-12 Identities = 134/190 (71%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| ||||| ||||||||||| ||| | || || ||| || Sbjct 37703440 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACACTCGAGGTGGAATCCTCC 37703381 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| ||| || || || |||||||| || ||||| || || Sbjct 37703380 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 37703321 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||||| || ||||| || || || || ||||| | | ||||| || Sbjct 37703320 CAGAGGCTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 37703261 Query 156003 ATATCCAAAG 156012 || || |||| Sbjct 37703260 AT-TCAAAAG 37703252 Score = 86.0 bits (94), Expect = 9e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||| || ||||||||||| || || || || ||| Sbjct 37703212 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 37703153 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| || || || ||||| || || || || || || || Sbjct 37703152 GATACCATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCCGATCAG 37703093 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || ||||| |||||| ||||| | | ||||||||| Sbjct 37703092 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 37703033 Query 156003 AT 156004 || Sbjct 37703032 AT 37703031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731530078550000