Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 104 4e-17 >seq1 Length=42234885 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | ||| ||||| ||||| || | |||||| ||||||||||| || || || || Sbjct 37707476 TCCTCGAGTTGCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTG 37707535 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || ||| || ||| || || || || ||||| || || || || ||| Sbjct 37707536 TCTTGAATCTTTGCTTTCACGTTATCAATGGTGTCGGAGGATTCAACCTCAAGGGTGATG 37707595 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || ||||| | |||||||||||| Sbjct 37707596 GTTTTGCCGGTCAAAGTTTTCACGAATATCTGCAT 37707630 Score = 104 bits (114), Expect = 4e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || || || | || | ||| || |||||| ||||| Sbjct 37712650 ATACCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATTGTAATCA 37712709 Query 171900 GATAAAGATCGTT-CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 | || | || || | || || | |||||||||||| ||||| | ||||| || ||||| Sbjct 37712710 G-CAAGGGTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTGATCAGG 37712768 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 || ||||| ||||| ||||| || || || |||||| || |||||||| || Sbjct 37712769 AGGGATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTC 37712828 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | || |||||||| ||||| || || || | || |||||||| Sbjct 37712829 CACCTCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 37712879 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || | || | || || || | || | ||| || |||||| ||||| Sbjct 37712878 ATACCACCCCTTAACCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCG 37712937 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || | || || | ||||||||||||||||| | || || || || || Sbjct 37712938 GCAAGGGTTCTCCCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGA 37712997 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| || || || ||| || |||||| || || || ||||||||| Sbjct 37712998 GGGATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCT 37713057 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || ||||| || ||||| || ||||| | || |||||||| Sbjct 37713058 ACTTCAAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 37713107 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||| ||||||||||| | | || ||||| ||||| |||||||| || ||||| || Sbjct 6126294 TGTTTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATC 6126353 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || ||| |||||| || |||||||| |||||||| ||||| ||||| ||||| Sbjct 6126354 TTGGCTTTCACATTATCAATGGTATCTGAGCTCTCTACTTCGAGAGTGATGGTCTTACCG 6126413 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | || |||| ||| || ||||| Sbjct 6126414 GTGAGAGTCTTAACGAAGATTTGCAT 6126439 Score = 100 bits (110), Expect = 5e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||| | | | || | |||| || | |||||||||||| ||||| | || Sbjct 37703258 AATGTTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAGCCT 37703317 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || || || || |||||||| || || || ||| || |||||| || || Sbjct 37703318 CTGCTGATCCGGAGGGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGT 37703377 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || ||||| || || || || || ||||| || || || ||||| | ||| || || Sbjct 37703378 ATCGGAGGATTCCACCTCGAGTGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTG 37703437 Query 172067 CAT 172069 ||| Sbjct 37703438 CAT 37703440 Score = 93.3 bits (102), Expect = 8e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | || | ||| | |||| || || |||||| || |||| Sbjct 37702301 ACCACCGCGAAGGCGAAGGACAAGATGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGC 37702360 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 || | || | || |||||||| || ||||||||||| | ||||| || || ||||| Sbjct 37702361 CAAGGTACGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGG 37702420 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||||| || || || || || || || |||||| || ||||| || || || Sbjct 37702421 GATTCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATTGTATCAGAGCTCTCCAC 37702480 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || | ||||||||||| || || | || || | |||||||||||| Sbjct 37702481 CTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCATT 37702529 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || || || || | ||| | ||| | ||| | ||| || ||| |||||||| Sbjct 6125754 ATACCTCCCCTCAGACGAAGTACAAGATGAAGAGTGGACTCCTTCTGAATGTTATAATCA 6125813 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || ||| | || || | || || ||||||||||| || || || ||||| || Sbjct 6125814 GCCAGAGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGA 6125873 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || || ||||| || || ||||| || || ||||| || Sbjct 6125874 GGAATGCCCTCCTTGTCCTGTATCTTGGCCTTGACATTGTCAATCGTGTCTGAACTCTCC 6125933 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | |||||| ||||| ||||| | || || | ||| |||||||| Sbjct 6125934 ACCTCCAAAGTAATTGTTTTTCCAGTAAGGGTCTTGACGAAAATCTGCAT 6125983 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||| ||| | || || || || ||||||| ||| || ||||||||||| Sbjct 37702983 ATGCCACCTCGAAGCCTCAAAACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAATCC 37703042 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || | | || || | ||||| |||||||| || | ||||| || || || Sbjct 37703043 GCAAGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCGGGG 37703102 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || ||||| || || || ||| |||||| || |||||||| || Sbjct 37703103 GGAATACCCTCCTTATCCTGAATCTTGGCTTTGACATTATCAATGGTATCTGAACTCTCC 37703162 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||||| ||||| || || || || || | || || ||||| Sbjct 37703163 ACCTCCAAGGTAATAGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37703212 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || | || ||||| | || | ||| || |||||| ||||| Sbjct 37707173 ATGCCGCCTCTCAAACGAAGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCA 37707232 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || | | || || | |||||| ||||| ||||| | ||||| ||||| || Sbjct 37707233 GCAAGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGA 37707292 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || ||||||||| || || ||||| || Sbjct 37707293 GGGATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTATCAATGGTGTCTGAACTCTCG 37707352 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||||||||| || || || || || | || || ||||| Sbjct 37707353 ACCTCAAGGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37707402 Score = 89.7 bits (98), Expect = 9e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || || |||| || | || | || ||||||||||| ||||||||||| | || Sbjct 37706536 AATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCT 37706595 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || ||||| || || || || ||||| || || ||| |||||| || || Sbjct 37706596 CTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTTGCTTTCACATTATCAATTGT 37706655 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || || || | |||||||| || || || | || || | |||||||| Sbjct 37706656 ATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTG 37706715 Query 172067 CATT 172070 |||| Sbjct 37706716 CATT 37706719 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 171879 TCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAA 171938 ||||| ||| || || |||| || | || | || |||||||| || ||||||||| Sbjct 37712233 TCTTTCTGAATGTTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGCTTCCCAGCAAAA 37712292 Query 171939 ATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 171998 || | ||||| || || ||||| || || || || || || || || | || |||||| Sbjct 37712293 ATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTCACATTA 37712352 Query 171999 GTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATG 172058 || ||||| || ||| || || | ||||||||||| || || | || || | Sbjct 37712353 TCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGTTTTCCCTGTCAGAGTCTTCACA 37712412 Query 172059 AATATCTGCAT 172069 || |||||||| Sbjct 37712413 AAAATCTGCAT 37712423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904713131775000