Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq182 158 4e-33 seq83 152 2e-31 seq21 122 3e-22 seq199 120 9e-22 seq8 114 4e-20 seq10 100 8e-16 seq9 91.5 4e-13 seq25 89.7 2e-12 >seq182 Length=1065506 Score = 158 bits (174), Expect = 4e-33 Identities = 289/418 (69%), Gaps = 8/418 (2%) Strand=Plus/Plus Query 288936 CTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGA 288995 || |||||||||||| ||| |||| ||| || || || ||||| ||||||||||| Sbjct 180458 CTCAAATCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCC 180517 Query 288996 ACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAA 289055 || | ||| || | | | ||||| | ||||||||||||||||| |||| || Sbjct 180518 TCCACC--AATT-CCAGTACC---CCTTTGCCTTCCAACAGCATCAATTTCATCAACAAA 180571 Query 289056 AATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCC 289115 || | || |||| ||| | | | || | ||||| || | || ||||| || || Sbjct 180572 AACAATGCATGGAGCATTCTCTTTGGCCTTCTTGAATAAATCGCGGACTCGGGAAGCACC 180631 Query 289116 AAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGC 289175 || ||||||| |||| || ||||| |||||| | || | | || |||| ||| ||| Sbjct 180632 AACACCAACAAACATCTCCACAAACTCAGAACCTGAGATTGAAAAAAATGGGACACCTGC 180691 Query 289176 TTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAG 289235 ||| ||||| | ||| | || | ||||||||| || |||||||| || || | | || Sbjct 180692 TTCACCTGCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAG 180751 Query 289236 AACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAA-AAATT 289294 ||| || ||||||| |||||| ||| | || |||| ||||| ||||| ||||| Sbjct 180752 AACACCTTTTGGTATGCGAGCCCCAACAGCAGTGAATCTCTC-GGGCTTTTTAAGAAATT 180810 Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | || | ||| || || | ||| || || || ||| || ||||| |||| || Sbjct 180811 CCACCACCTCCATAAAATCCTGTTTGGCTTCGTCCACTCCAGCAACATCGTCAAATGT 180868 >seq83 Length=883202 Score = 152 bits (168), Expect = 2e-31 Identities = 320/468 (68%), Gaps = 17/468 (4%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT---AGATTCGGTTTGCTTA 288939 ||||| ||||| | || |||||| ||||||| ||||||| ||| |||| | Sbjct 308214 TCTAAGATATCAGGCCTATTTGTTCCTGCCAACACAACAACCCCAGAAGTGGTTCC---A 308270 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || | |||||| | ||| ||| | |||||||||||||| Sbjct 308271 AAACCATCCATCTCCACCAACAATTGATTCAATGTACTTTCACGCTCATCATTTGAACCA 308330 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 || |||| | | |||| ||||| |||||||| || ||||| || || Sbjct 308331 GAAAAACCACC---ACGCCCCCTTGCCCGACCAATTGCATCAATCTCATCAATAAATATT 308387 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGCA--AATAATTCTCTTACACGGGATGCTCCAA 289117 | || ||||| | ||| || || || || || || | ||| || | |||||||||| Sbjct 308388 ATACTCGGAGCACATTGCCTTGC--TTCCAGAAACAAGTTTCTCACCCTTGATGCTCCAA 308445 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA-TGTTACATTTGCT 289176 ||||||| ||||||| | || |||||| | |||| | ||| ||| || || | | Sbjct 308446 CACCAACAAACATTTCCATGAAATCAGAACCAGATA-TAGAAAGAAATGGCACCCCAGAT 308504 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || ||||| ||| | || |||||||| || |||||||| || || ||| | || ||| Sbjct 308505 TCCCCTGCAGTTGCTTTTGCTAGAAGTGTTTTTCCTGTTCCTGGAGGACCCACCAAGAGA 308564 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTC 289295 | || ||||| | |||||| || | ||| |||||||| ||| |||| | || | Sbjct 308565 GCACCTTTTGGAATTTTTGCACC-GAGTTCTTCATATTTCTTTGGGTTCTTGAGGAAATG 308623 Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| || |||| |||||||||||| || || || ||||| Sbjct 308624 GACAAACTCCATAATTTCAAGTTTTGCCTCATCGCAGCCAGCAACATC 308671 >seq21 Length=722760 Score = 122 bits (134), Expect = 3e-22 Identities = 338/511 (66%), Gaps = 22/511 (4%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||||| || | | ||| || | ||| | || || || ||||| |||||| Sbjct 271436 CTATCAAACCGTCCTGGTCTCAATAAGGCAGAGTCAAGAATGTCTGCCCTGTTAGTTGCT 271377 Query 288910 GCCAATACAACAATAGATTCG-GTTTG---CTTAAATCCATCCATACTTGTTAAAATTTG 288965 || ||| ||||| ||| | || | || ||| |||||||| ||| |||| ||| Sbjct 271376 GC-AATG--ACAAT-GATGCCAGTATTACCCTCAAAACCATCCATTTCTGTCAAAAGTTG 271321 Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACC----CGAATCGCTCC 289021 || || || || || |||||||||||| |||| |||| | | | || | Sbjct 271320 GTTGAGGGTCTGCTCTCTTTCATCATTT---CCTC------CACCAATTCCAGTTCCT-C 271271 Query 289022 tttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCG 289081 ||| | | ||||||||||||||||| |||| || | | || || | |||| | | | Sbjct 271270 TTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAAGGGGCGTTTTCTTTGG 271211 Query 289082 CAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATT 289141 | | || || || | || || || || |||| ||||||| |||| || ||||| | Sbjct 271210 CCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACT 271151 Query 289142 CAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 ||||| |||||| | || |||| ||| ||||| || || | ||| | |||| | Sbjct 271150 CAGAACCGGATATTGAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACA 271091 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAG 289261 | ||||| || ||||| || || || | | |||||||| || |||| |||||| Sbjct 271090 GGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCTTTAGGTATGCGAGCCCCAA 271031 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 ||| | | ||||||| |||| | ||| || || | ||| || || | || | Sbjct 271030 CAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTCCATAAAGTCCTGCTTGG 270971 Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | ||||| || || |||||| |||| || Sbjct 270970 CTTCATCCACCCCAGCAACATCATCAAATGT 270940 >seq199 Length=701003 Score = 120 bits (132), Expect = 9e-22 Identities = 232/340 (68%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597 |||||| || ||| |||||| || ||| ||||| |||||| ||| | | || | Sbjct 630409 ATTTCTAACAGTCCCATCATATTTAACCATGATGTCCTCCATAGCCTTCACCAGTCGCCT 630350 Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657 ||| ||||| |||||| ||| || || || || |||||||| ||||| | | |||||| Sbjct 630349 CTGGATATACCCAGTTTCAGAGGTCTTCACGGCAGTATCAATAAGACCTTCCCTACCACC 630290 Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717 ||| ||||| || || | ||||| || | || | | | | ||| |||| || || Sbjct 630289 CATGGCATGAAAAAAGAACTCTTGAGGGGTCAATCCTCGCAGATATGAGTTCTCCACAAA 630230 Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCAT 302776 ||||| || ||| || || || || || || |||| ||||| | | | | Sbjct 630229 GCCACGACTTTCAGGCCCATAATCATCTTTTGTGAAATGAGGCAATGTCCTATCTATGA- 630171 Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 | || ||||| || || || || ||||||||||| || |||| || | | |||| || | Sbjct 630170 ACCCATATGGAATTCGTTTACCCTCAACGTTCTGTTGGCCCACACAAGCAGTCATTTGAG 630111 Query 302837 AAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 | || || | | ||| || ||||| ||||| | ||||| Sbjct 630110 ATATGTTGATAAAACTTCCTTTGGAACCAGCTGTCACCAT 630071 >seq8 Length=30791815 Score = 114 bits (126), Expect = 4e-20 Identities = 316/470 (67%), Gaps = 21/470 (4%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT-TGCTT--A 288939 ||||| ||||| | || || ||| ||||||| ||||||| | ||| || || | Sbjct 2102783 TCTAAGATATCAGGCCTATTCGTTCCTGCCAAAACAACAAC---TCCGGAAGTGGTTCCA 2102839 Query 288940 AATCCATCCATACTTGTTAAA-ATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 || |||||||| || | || | |||||| | ||| ||||| |||||||||| ||| Sbjct 2102840 AAACCATCCAT-CTCGACCAACAATTGATTCAATGTACTTTCCCGCTCATCATTTGCACC 2102898 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 || |||| | | |||| | ||||| ||||||||||| ||||| || || Sbjct 2102899 AGAAAAACCACC---ACGCCCCCTTGCTCGACCAATTGCATCAATTTCATCAATAAATAT 2102955 Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCA 289116 | || |||| | ||| || || || | ||| || | ||| || | |||| |||| Sbjct 2102956 TATACTAGGAGCACATTGCCTTGC--TTCCTGAAACAAATTTCTCACCCTTGATGGTCCA 2103013 Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATG-AATGTTACATTTGC 289175 | ||||||| ||||||| | || ||||| | |||| | ||| | |||| || | Sbjct 2103014 ACACCAACAAACATTTCCATGAAATCAGACCCAGATA-TAGAAAGAAATGGCACCCCAGA 2103072 Query 289176 TTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAG 289235 || ||||| ||| | || | |||||| || || || || || || || | || || Sbjct 2103073 CTCCCCTGCAGTTGCTTTTGCTAAAAGTGTTTTTCCAGTACCCGGAGGACCAACCAAAAG 2103132 Query 289236 AACTCCCTTTGGTACTTTTGCCCCAGCAG-ACTT-ATATTTCTCAGGGCTCTTTAAAAAT 289293 | | || ||||| | |||||| ||| || ||| ||||||| ||| |||| | || Sbjct 2103133 AGCACCTTTTGGAATTTTTGCACCA--AGTTCTTCATATTTCCTTGGGTTCTTGAGGAAG 2103190 Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | || | ||| | |||| ||||||||||||||| || || || || Sbjct 2103191 TGGACGAACTCCATTATTTCAAGTTTTGCCTCATCACAGCCAGCAACGTC 2103240 >seq10 Length=40424437 Score = 100 bits (110), Expect = 8e-16 Identities = 106/138 (77%), Gaps = 4/138 (3%) Strand=Plus/Minus Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 ||||||| | ||||| |||||||| || || | ||||||||| | |||||||| ||| Sbjct 39322146 TTGCAAAGAGATCTCTCACACGGGAAGCACCCATACCAACATATAACTCTACAAACTCAC 39322087 Query 289145 AAGCGGAT--ACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| || |||| || |||| ||||| ||||| ||||| || ||| ||||||| | Sbjct 39322086 TAGCAGAACAACTT--ATAAATGGTACATCAGCTTCCCCTGCCACAGCCTTCGCCAGTAA 39322029 Query 289203 TGTCTTACCTGTTCCAGG 289220 ||||||||||| ||||| Sbjct 39322028 AGTCTTACCTGTCCCAGG 39322011 >seq9 Length=31747250 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 ||||||||| ||||| |||||||| || || | ||||||||||| |||||| || ||| Sbjct 16711320 TTGCAAATAGATCTCTAACACGGGAGGCACCCATACCAACATACAATTCTACGAACTCAC 16711379 Query 289145 AAGCGGA--TACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| || |||| || |||| |||| ||||| || || || ||| | || || | Sbjct 16711380 TAGCAGAACAACTT--ATAAATGGCACATCAGCTTCCCCAGCCACAGCCTTTGCTAGTAA 16711437 Query 289203 TGTCTTACCTGTTCCAGG 289220 ||||||||||| ||||| Sbjct 16711438 AGTCTTACCTGTGCCAGG 16711455 >seq25 Length=312266 Score = 89.7 bits (98), Expect = 2e-12 Identities = 83/105 (79%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||| || |||||||| ||||| || ||||| | |||||| |||| || Sbjct 242301 TACCTTTCCTCTTGCCTCCCCCCTGATCAACATAGCGGGCAGTATCATTGAACACACGTA 242242 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATAT 156150 ||| |||| ||| || ||||| || ||||| || || ||||||| Sbjct 242241 ACATTGGAACAATGCCGTTGGACGTCCCATTTGTCCCACGAATAT 242197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471112794845375