Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq37374 641 4e-179 seq6 223 4e-53 seq9 215 6e-51 seq10 95.1 1e-14 seq5 82.4 8e-11 >seq37374 Length=151683 Score = 641 bits (710), Expect = 4e-179 Identities = 752/1014 (74%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 152359 TTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGA 152418 |||||| | ||||||||||| | ||| ||||||||||||||||| |||||||| || Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 152419 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 152478 || | || ||||| || ||| | || | || |||||| |||| || || || || Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 152479 GCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTT 152538 | || |||||||||||||| ||||||||||| ||| | || ||| ||||| | Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTA 30982 Query 152539 ACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 152598 || || |||||||| ||||| || || | | | || ||| | || | || |||||| Sbjct 30981 ACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGT 30922 Query 152599 CCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTG 152658 ||||| || || || ||||| | | ||| |||| | || || || ||| ||||||| Sbjct 30921 CCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGTT 30862 Query 152659 GCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG- 152717 || |||||||| ||||||| |||| ||||||||| | || || |||||||| || || Sbjct 30861 GCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 30802 Query 152718 TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGT 152777 ||| || | | || || || ||||| || || ||||| ||||| || ||||||||||| Sbjct 30801 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTTGT 30743 Query 152778 TAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGG 152837 | || ||||| || || || |||||||| || ||||||| || ||||| ||| || Sbjct 30742 TTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGG 30683 Query 152838 GGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAA 152897 || ||||| || || |||||| | ||||| | |||||||| || || |||||||| || Sbjct 30682 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTAAA 30623 Query 152898 TCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCA 152957 || |||||||||||||| ||||| ||| | ||||| | || | || | || ||||| Sbjct 30622 CCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATTCA 30563 Query 152958 TGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGC 153017 ||||| || ||||| |||||||| | | |||||||||| ||||| || ||| || Sbjct 30562 TGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 30503 Query 153018 TTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTC 153077 ||| || || |||| ||||| || ||||| |||||||||||||| || || ||||| Sbjct 30502 TTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGGTC 30443 Query 153078 CCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGT 153137 ||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||| Sbjct 30442 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 30383 Query 153138 ACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCG 153197 ||| || | ||| | |||| | || |||| | | ||| | || || || | || Sbjct 30382 ACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTACG 30323 Query 153198 TGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTT 153257 |||||| || || || |||||||||||| | || | |||||||||||||||||||| || Sbjct 30322 TGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACTTT 30263 Query 153258 CTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCA 153317 ||| || || ||||| || || ||||||||| ||||||| ||| ||||| || || || Sbjct 30262 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGATCA 30203 Query 153318 ACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 |||||||| ||| | | |||||||| ||||| | ||||| || |||||||| Sbjct 30202 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 30149 Score = 605 bits (670), Expect = 3e-168 Identities = 732/990 (74%), Gaps = 6/990 (1%) Strand=Plus/Minus Query 150838 CTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCT 150897 ||| ||| | ||| | ||| || | || ||||| || | || ||||| ||||| | Sbjct 4313 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4254 Query 150898 GATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATCGCTGCTCC 150957 ||||||||| ||| | ||| | ||||| | || || | || || |||||||| || Sbjct 4253 GATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 150958 CCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAA 151017 || || || || ||||| || ||||| || ||| |||| ||||| | || || ||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 151018 CATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCAT 151077 ||||| |||||||| || ||||| ||||| ||||| ||| |||| || ||||| || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 151078 CTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 151137 ||||||||||| ||| | ||||||||| | |||||||| ||||||| |||| |||| Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 151138 CTTCCACTTCCTGATTGGTAT--CTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTAC 151195 | |||||| | ||||| | || |||| |||||||||||||||||||||| || Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTT 3956 Query 151196 CGCTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAG 151254 || ||||||||||||| ||||| ||| |||||||| || ||||| ||||| || || | Sbjct 3955 CGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTAC 3897 Query 151255 TGCAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGG 151314 ||| || ||| | |||||||| | |||||||| || || |||| ||||| || || Sbjct 3896 TGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGG 3837 Query 151315 TATTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCA 151374 |||||||| || ||||| | ||| |||| || || || ||||| || ||||| ||||| Sbjct 3836 AATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 3777 Query 151375 CCCCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCA 151434 || || || ||| | ||||| |||||||| ||||| || || || ||| || ||||| Sbjct 3776 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 3717 Query 151435 CGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTA 151494 ||||| |||| |||||| || | | || ||||| ||||| || ||| || | Sbjct 3716 TGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGA 3657 Query 151495 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTT 151554 ||||||| || |||||||| ||||| || || || || || || || || ||||| || Sbjct 3656 AGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTT 3597 Query 151555 TGGTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCT 151614 ||| || | ||||||||||| || ||||||||||| ||||| | || |||||||| Sbjct 3596 TGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 3537 Query 151615 CGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATT 151674 || || |||||||| || ||||| ||||| || || | ||| ||||||| ||||| || Sbjct 3536 AGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTT 3477 Query 151675 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAA 151734 |||| | || ||||| || |||||||| ||| | | ||| |||| || || | || Sbjct 3476 CAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAA 3417 Query 151735 CACCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAA 151794 |||||||| || || | ||||| || || ||||||||||| ||||| || ||||| Sbjct 3416 TACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAA 3357 Query 151795 TGCTCACAACTTCCCTCTCGACCTTGCTGC 151824 |||||| || |||||||| || || ||||| Sbjct 3356 TGCTCATAATTTCCCTCTAGATCTAGCTGC 3327 >seq6 Length=19356003 Score = 223 bits (246), Expect = 4e-53 Identities = 308/431 (71%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 151393 TGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTC 151452 ||| |||||||| ||||| || || || ||| | ||| | ||||| |||| ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 151453 TTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCA 151512 | || | | || ||||| ||||| || | || | |||||||| || ||||| Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 151513 AGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCA 151572 ||||||||| || || || || || || || || | || ||||| || | |||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 151573 ATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGT 151632 ||| || ||||||||||| ||||| | | |||||||| || || |||||| | || Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 151633 CGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAA 151692 ||||| ||||| || || | ||| ||||||| |||| |||||| | || ||||| || Sbjct 3411013 AGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAA 3411072 Query 151693 CTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCT 151752 |||||||| ||| | || ||| |||| || || | || |||||||| || || | Sbjct 3411073 TTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTAT 3411132 Query 151753 GAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCT 151812 ||||| || || ||||||||||| ||| | || ||||||||||| || || ||| | Sbjct 3411133 TAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTT 3411192 Query 151813 CGACCTTGCTG 151823 || | |||| Sbjct 3411193 AGATTTAGCTG 3411203 >seq9 Length=31747250 Score = 215 bits (238), Expect = 6e-51 Identities = 235/312 (75%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 152803 GGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCCGATTCCTT 152862 ||||| || ||||||| || ||||| ||| || || ||||| || || |||||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 152863 CTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATATGATGGGTGTTGCA 152922 ||||| | |||||||| || || |||||||| || || |||||||||||||| ||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 152923 GGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTG 152982 ||| | ||||| | || | || | || |||||||||| || ||||| |||||||| Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 152983 TATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGACAGCACTCAAGAAGAAGAG 153042 | | |||||||||| ||||| || ||| ||||| || || |||| ||| | Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 153043 ACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGC 153102 || ||||| |||||||||||||| || || |||||||| || ||||| |||||||| | Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 153103 AATAAACGCTGG 153114 |||||||| ||| Sbjct 26587302 AATAAACGTTGG 26587291 >seq10 Length=40424437 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 150990 TTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTT-CTTCT 151048 || |||| ||||| | || || ||||| ||||| | |||||| | ||||| | | | Sbjct 28818845 TTTCTGGATCTCTACTTTATGGAAACAATATCATTTGTGGTGCAAATAGTCCTTACGTAT 28818904 Query 151049 AACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGGC-- 151106 || | ||| |||| || ||||| | || ||||||||| ||| | ||||||||| Sbjct 28818905 GTAACTGTAGGTTTGCATTTTTATCCAACCTAGGAAGCAGCTTCTGTTGATGAATGGTGG 28818964 Query 151107 -TCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTATCTATGCT 151165 | | |||||||||||||| |||| |||| | |||||| | ||||| | | Sbjct 28818965 TTATGCAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTATTTGGTGTAGCTTAC 28819024 Query 151166 TACATGGGTCGTGAGTGG 151183 |||||||||||||||||| Sbjct 28819025 TACATGGGTCGTGAGTGG 28819042 >seq5 Length=30687117 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 151496 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTT 151555 ||||||| || |||||||| ||||| || || || || | | || || ||||| ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 151556 GGTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTC 151615 || || | ||||||||||| | ||||| | || |||| | || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 151616 GCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGC 151650 || || |||||||| || ||||| ||||| || || Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549365623285000