Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 235 7e-56 seq199 96.9 4e-14 >seq3 Length=41204908 Score = 235 bits (260), Expect = 7e-56 Identities = 228/293 (78%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||||||||| || || | |||| || ||||| Sbjct 34261040 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAAGCACGAGCCTCGGCGGCTTGG 34260981 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 | ||||||||||| ||| | || ||||| ||| |||||||||||| |||||| || Sbjct 34260980 ATTTCCTTCATGAAGCGGGCAGCGAGGTTTTCGAGAACGATGCCGTCGGAGGCGGCAAAG 34260921 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || |||| ||| |||| |||||||||||| ||||| |||| || |||||||| | Sbjct 34260920 AAGGCGAGGATGTGGGTGATGAAGTGGCGCTCGCCGTCGGTGAGGGAGTCCCAGTGGCGG 34260861 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 ||| | |||||| ||||| ||||||||||||| || || ||||| || |||||| Sbjct 34260860 AGGTCTTGGGAGAGGTCAACCTCTTCGGCGGTCCAGAAAGAAGCTTCGGCTTTCTTGTAC 34260801 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTT 869925 || ||||| | ||| |||| |||| ||||| | | ||||||| |||||| Sbjct 34260800 ATTTCCCAGATTTGGGGGTATTGGATTGGGAACATGCAGAAGCGGTCGGGGTT 34260748 Score = 219 bits (242), Expect = 5e-51 Identities = 214/273 (78%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| ||||||||||| ||||||||||||||||||||||| | |||| | || ||| Sbjct 26200640 GAGTGAATGTTCTCGATAGCGATCTGGAAGCCGTAAAAGGCGCGAGCCTCGGAGACCTGG 26200699 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||||||||| || |||||||| ||||| || |||||||||||| ||||||||| Sbjct 26200700 ACCTCCTTCATAAAACGGCCGGCAAGGTTTTCTAGTACGATGCCGTCGGAGGCGGCGAAG 26200759 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || ||||| || ||| || ||||||||| ||||| | || | |||||| | Sbjct 26200760 AAGGCGAGGACATGGGTGACGAAATGGCGCTCGCCGTCGGTAAGAGTGTTCCAGTGACTG 26200819 Query 869813 GTGT-CGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 ||| | ||| ||||||||||||||| || ||||||| |||||| || || || ||||| Sbjct 26200820 ATGTCCTGCG-AGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCTGCTTTCTTGTA 26200878 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 ||| ||||| | ||| |||| |||||||||| Sbjct 26200879 CATTTCCCAGATTTGGGGGTATTGGATAGGGAA 26200911 Score = 154 bits (170), Expect = 2e-31 Identities = 194/266 (73%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 869186 TCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 869245 |||||| ||| | ||||||| |||| ||| |||||||| | ||| |||||||||||| Sbjct 34261311 TCGCGA--GATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAGCCACGCTTCTTGAGC 34261254 Query 869246 CAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATG 869305 ||||| || | |||||| ||||| ||||| ||||| ||||| ||| ||| ||| ||| | Sbjct 34261253 CAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCAACGCAGGCGAAGGCGACG 34261194 Query 869306 AGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCC 869365 || |||||||| |||| |||| | | || |||||| || ||||| | |||| Sbjct 34261193 AGGCGCTCGGCGAAGGAGTCGGTGGCATC------GATCCAGCGCAAGGCCCATTGGGCC 34261140 Query 869366 TTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGG 869425 || || || | || | || |||| |||||| || ||||| | |||||||| | | Sbjct 34261139 TTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAACAGGTGATTCTTTTCGGTGGAG 34261080 Query 869426 TCCTTGACATAGGTGTCGATCAGGAG 869451 || |||| ||||| || | ||||| Sbjct 34261079 TCTTTGATGTAGGTTTCCAAGAGGAG 34261054 Score = 145 bits (160), Expect = 9e-29 Identities = 197/274 (72%), Gaps = 8/274 (3%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | ||||||| || | ||| || ||||||||||| || || Sbjct 26200360 ACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCATGAGGCCCCGTTT 26200419 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| ||| || || || ||||| ||||| ||||||||| |||||| Sbjct 26200420 CTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTCGACGCAGGCAAA 26200479 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTC-GAGGCCCTCCTTGTTGATCCACTTCATCGCCC 869357 | ||| ||| |||||||| |||| || |||| || |||||| | |||| Sbjct 26200480 GGCGACGAGGCGCTCGGCGAAGGACTCGGAGG-------AGTCGATCCAGCGGAGGGCCC 26200532 Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 ||| |||||| || | || | || | ||||| |||||| ||||||| || || | Sbjct 26200533 AGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGCGTGAAAGAGACGGGTTTTCT 26200592 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451 | | | ||| || | ||||| |||| ||||| Sbjct 26200593 CTACGGAGTCTTTTATGTAGGTTTCGAGGAGGAG 26200626 Score = 127 bits (140), Expect = 2e-23 Identities = 223/322 (69%), Gaps = 7/322 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||| ||||||||| |||||| ||||||||||| |||| ||||| ||| Sbjct 26200046 GCCTTCTGGTACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATC 26200105 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||||||| ||| ||||| | ||||| ||| |||| || || | || Sbjct 26200106 AGCTCCATCCAATCGAATGGGTTCTGTACATTGTACACCTTCCCGCACCCAAGGGCACCG 26200165 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||| | || || |||||||| |||||||| | ||| | | | ||||||| || | Sbjct 26200166 AGCAACCTATCAGCAACAAACTCAATGTACTGACTCATCAAGGCCCCGTTCATCCCCACC 26200225 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 | ||| || |||| |||| || ||||| ||||||| || || || ||| | Sbjct 26200226 AACGCACAAGGAAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACAGCATCGCGCACA 26200285 Query 868931 ATCTGCCTGGGCACG---TCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 |||| ||| |||| || | | | ||||| | | || | |||||||||||| Sbjct 26200286 ATCTCCCT---CACGCGCTCCTCGGGGAGCTTGGTCCGCATAATAGAGTAGAGCAGGCAA 26200342 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 || |||||||| || | ||||| Sbjct 26200343 GCGAAGTCGCAATGGAGACCCT 26200364 >seq199 Length=701003 Score = 96.9 bits (106), Expect = 4e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| |||||||| ||||| |||||| ||| || |||| || || Sbjct 480661 GCTGCGAACTACCTGAACATCAAGAGCCTGCTGGATCTTACATGCCAGACTGTAGCAGAC 480720 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || ||||| || ||||||||||||||||| ||| Sbjct 480721 ATGATCAAGGGGAAGACTCCAGAGGAAATTCGCAAGACCTTTAACATTAAG 480771 Score = 96.9 bits (106), Expect = 4e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| |||||||| ||||| |||||| ||| || |||| || || Sbjct 488227 GCTGCGAACTACCTGAACATCAAGAGCCTGCTGGATCTTACATGCCAGACTGTAGCAGAC 488286 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || ||||| || ||||||||||||||||| ||| Sbjct 488287 ATGATCAAGGGGAAGACTCCAGAGGAAATTCGCAAGACCTTTAACATTAAG 488337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104072032472875