Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 196 8e-44 >seq3 Length=41204908 Score = 196 bits (216), Expect = 8e-44 Identities = 237/321 (74%), Gaps = 9/321 (3%) Strand=Plus/Minus Query 794347 TCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 794406 |||||| ||| | ||||||| ||| ||| |||||||| | ||| |||||||||||| Sbjct 34261311 TCGCGA--GATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAGCCACGCTTCTTGAGC 34261254 Query 794407 CAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACG 794466 ||||| || | ||||| ||||| ||||| ||||| ||||| ||| ||| ||| ||||| Sbjct 34261253 CAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCAACGCAGGCGAAGGCGACG 34261194 Query 794467 AGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCC 794526 || |||||||| || | ||| | | || |||||| || ||||| | ||| Sbjct 34261193 AGGCGCTCGGCGAAGGAGTCGGTGGCATC------GATCCAGCGCAAGGCCCATTGGGCC 34261140 Query 794527 TTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGG 794586 || || || |||| | || |||| |||||| || ||||| | ||| ||| | | Sbjct 34261139 TTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAACAGGTGATTCTTTTCGGTGGAG 34261080 Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646 || |||| |||||| || | |||||| ||| |||| ||||||||||| ||||||||| Sbjct 34261079 TCTTTGATGTAGGTTTCCAAGAGGAGACTGTACATCTCGGAGTGGATGTTCTCGATGGCG 34261020 Query 794647 ATCTGGAAGCCATA-AAAGCA 794666 ||||||||||| || |||||| Sbjct 34261019 ATCTGGAAGCCGTAGAAAGCA 34260999 Score = 194 bits (214), Expect = 3e-43 Identities = 239/326 (73%), Gaps = 8/326 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| |||||||| ||| | ||||||| || ||| || ||||||||||| || || Sbjct 26200360 ACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCATGAGGCCCCGTTT 26200419 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| || || || || ||||| ||||| ||||||||| |||||| Sbjct 26200420 CTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTCGACGCAGGCAAA 26200479 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTC-CAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 | ||||||| |||||||| || | || ||| || |||||| | |||| Sbjct 26200480 GGCGACGAGGCGCTCGGCGAAGGACTCGGAGG-------AGTCGATCCAGCGGAGGGCCC 26200532 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | | ||||| || | || |||| | ||||| |||||| ||||||| || |||| Sbjct 26200533 AGTTGGCCTTCTTGGTGACGCAGGGAATGGTGTCAATGGCGTGAAAGAGACGGGTTTTCT 26200592 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | || | ||| || | |||||| |||| |||||| ||| |||| ||||| ||||| | Sbjct 26200593 CTACGGAGTCTTTTATGTAGGTTTCGAGGAGGAGGCTGTACATCTCGGAGTGAATGTTCT 26200652 Query 794639 CGATGGCGATCTGGAAGCCATAAAAG 794664 |||| |||||||||||||| |||||| Sbjct 26200653 CGATAGCGATCTGGAAGCCGTAAAAG 26200678 Score = 179 bits (198), Expect = 6e-39 Identities = 189/249 (76%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| |||||| ||||||||||||||| | || ||||| || ||||||||| Sbjct 34260995 GCCTCGGCGGCTTGGATTTCCTTCATGAAGCGGGCAGCGAGGTTTTCGAGAACGATGCCG 34260936 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||| || |||||||||| ||| |||| ||||| |||||| ||||| |||| Sbjct 34260935 TCGGAGGCGGCAAAGAAGGCGAGGATGTGGGTGATGAAGTGGCGCTCGCCGTCGGTGAGG 34260876 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 ||| |||||||| ||| | |||||| ||||| ||||||||||| || || || Sbjct 34260875 GAGTCCCAGTGGCGGAGGTCTTGGGAGAGGTCAACCTCTTCGGCGGTCCAGAAAGAAGCT 34260816 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 ||||| || |||||||| ||||| || | |||| |||| ||||||| ||||| Sbjct 34260815 TCGGCTTTCTTGTACATTTCCCAGATTTGGGGGTATTGGATTGGGAACATGCAGAAGCGG 34260756 Query 796390 TTGGGGTTC 796398 | ||||||| Sbjct 34260755 TCGGGGTTC 34260747 Score = 163 bits (180), Expect = 4e-34 Identities = 178/231 (77%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct 26200685 GCCTCGGAGACCTGGACCTCCTTCATAAAACGGCCGGCAAGGTTTTCTAGTACGATGCCG 26200744 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| ||||||||||| || ||| || || |||||| ||||| | || Sbjct 26200745 TCGGAGGCGGCGAAGAAGGCGAGGACATGGGTGACGAAATGGCGCTCGCCGTCGGTAAGA 26200804 Query 796270 GAGACCCAGTGGACCG-TGT-CGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGG 796327 | | ||||| ||| | ||| | ||| |||||| |||||||| || ||||| || |||| Sbjct 26200805 GTGTTCCAGT-GACTGATGTCCTGCG-AGAGGTCCACCTCCTCCGCCGTCCAGAACGAGG 26200862 Query 796328 CCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 | || || || |||||||| ||||| || | |||| |||| ||||||| Sbjct 26200863 CTTCTGCTTTCTTGTACATTTCCCAGATTTGGGGGTATTGGATAGGGAACA 26200913 Score = 136 bits (150), Expect = 6e-26 Identities = 224/314 (71%), Gaps = 12/314 (4%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||| ||||||||| |||||| ||||||||||| |||| ||||| |||| ||||||| Sbjct 26200055 TACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAGCGAAATCAGCTCCATC 26200114 Query 793968 CACGGGAACGGGTTGGCCGT-CA-GGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025 || ||| ||||| | || || ||| |||| ||||||| || | | |||| | Sbjct 26200115 CAATCGAATGGGTT--CTGTACATTGTACACCTTCCCGCACCCAAGGGCACCGAGCAACC 26200172 Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085 || || || || ||||||||||| | ||| | ||| ||||||| || | | ||| Sbjct 26200173 TATCAGCAACAAACTCAATGTACTGACTCATCAAGGCCCCGTTCATCCCCACCAACGCAC 26200232 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145 || |||| |||| ||| ||||| ||||||| || || || ||| | |||| || Sbjct 26200233 AAGGAAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACAGCATCGCGCACAATCTCCC 26200292 Query 794146 T---GGGCACGTCGGACGACGGCTT-GTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAG 794201 | | || | |||| || |||| ||| | | || | |||||||||||| || ||| Sbjct 26200293 TCACGCGCTCCTCGG-GGA--GCTTGGTCCGC-ATAATAGAGTAGAGCAGGCAAGCGAAG 26200348 Query 794202 TCGCAATGCAGACC 794215 |||||||| ||||| Sbjct 26200349 TCGCAATGGAGACC 26200362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912270650782625