Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_022966.1 Length=88135 Score E Sequences producing significant alignments: (Bits) Value seq1272 82.4 4e-11 >seq1272 Length=102696 Score = 82.4 bits (90), Expect = 4e-11 Identities = 188/278 (68%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 77729 CTTGAAGTAGCGGGCAATCTCTGCCCCGGTCCCCAGGACGTTGACGTAGCCCCCTTTGGG 77788 ||||||||| ||| ||||||| || || || |||||| ||| | || || || Sbjct 79887 CTTGAAGTACTTGGCGATCTCTGTGCCAGTACCTGCGACGTTTCGGTACGCACCCTTAGG 79828 Query 77789 GCGGCGAAGTTTCTCGCTG-AGCTTGGCCCCGAACACCCCATATGCCAGGCCGTGGGTCG 77847 || || || | | || | || ||||| ||||| | ||||| |||| |||||| | Sbjct 79827 TCGCTTCAGCTTGT-GTTGCAACTGTGCCCCAAACACGCGGTATGCGAGGCTGTGGGTGG 79769 Query 77848 TCTTCTTTACCACCCACTGCGGGAACTTGTTCTTGGCCTCTTCTGCCATGGACTTGTTGA 77907 || | | ||||| ||||| | ||||| || ||||| | |||||||| Sbjct 79768 TCATGCAGTCAACCCAGCCGGGGAAGCGCTCTTTGGCGTCCATTGCCAGTGCCTTGTTGA 79709 Query 77908 AGGCCAGGTACAGGGA-GGTAACCTGGAGGCGTTGAGAGACCAGGCTCATGGTGGTGGTC 77966 ||| |||| ||||||| ||| | | ||| | | | |||| | ||| |||||||| Sbjct 79708 AGGTCAGGAACAGGGATGGTGATGGGTTGGCATCG-GCCACCATGGTCAGTGTGGTGGTT 79650 Query 77967 TTCGCTGCACCGGCACCAGCATTGATTTTCAGGCGGCG 78004 || | |||||||||| || ||||| || |||||||| Sbjct 79649 TTGGATGCACCGGCATATGCCTTGATCTTGAGGCGGCG 79612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 281778789068000