Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_023601.1 Length=97906 Score E Sequences producing significant alignments: (Bits) Value seq1272 141 6e-29 >seq1272 Length=102696 Score = 141 bits (156), Expect = 6e-29 Identities = 114/138 (83%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 11039 TTCTTCTTGCTGTCAGTCTTCGGGTCTTTGTAGATTGCAACATCCTTACCGTCGATAACG 11098 |||||||| |||||||||||||| ||||||||||| |||| |||| |||| | | | Sbjct 16784 TTCTTCTTACTGTCAGTCTTCGGATCTTTGTAGATAGCAATGTCCTCGCCGTTAACACGG 16725 Query 11099 GAGTGGGTTGCTTTCACAGCGAAGCCGAAAACATCACGTGTCACACACTGGTAGGTGTAA 11158 | ||||||||| || |||| |||||||| |||||||| |||| ||||||||||||||| Sbjct 16724 GTGTGGGTTGCCTTGACAGTAAAGCCGAATACATCACGGGTCAGGCACTGGTAGGTGTAA 16665 Query 11159 GAACCAACACCAAACACA 11176 ||||| | ||||||||| Sbjct 16664 GAACCGATGCCAAACACA 16647 Score = 116 bits (128), Expect = 2e-21 Identities = 236/346 (68%), Gaps = 6/346 (2%) Strand=Plus/Minus Query 82481 ATTTATCGTGGTAACGTAGCTGCTGGCTGGTGGAAGAACATCAGCACAAATGAAGCCTTC 82540 || ||| ||| ||||| ||||||||||||| || | ||| ||| | Sbjct 58136 ATCTATGCTGGCAACGTCAAAGCTGGCTGGTGGACCAATCTTGCCACGGGTGATCTCAAG 58077 Query 82541 CCAAAGGGCGACATTACCCTGATCCTGTCCAAGCTGGCGCTGGTGCATAGCGAGGTAAGT 82600 || | || || | ||| |||||| |||||||||| |||||||| || || ||| Sbjct 58076 CCGCAAGGTGATGTGACCGAGATCCTTGCCAAGCTGGCACTGGTGCACAGTGAAGTATCC 58017 Query 82601 GAAGCCACTGAGGGCGTTCGTAAGAACCTGATGGACGACAAGCTGCCGCACCGTCCAATG 82660 || || || || |||||||| |||||||| ||||| || || || ||| ||| Sbjct 58016 GAGGCTCTGGAAGGTTGCCGTAAGAATCTGATGGATGACAAACTTCCTCATCGTAAGATG 57957 Query 82661 GCCGAAGTGGAACTGGCTGACGCCATCATCCGTGCAT--TCGACCTTGCTGGTCACGAAG 82718 ||| ||||| ||||| |||||| | |||| |||| | || || ||| || || | Sbjct 57956 ATCGAGGTGGAGCTGGCAGACGCCCTGATCC--GCATCCTTGATCTGTGTGGCCATGAGG 57899 Query 82719 GT-TGGAACTTGGCTGGTGCAATTATCGAGAAGCTGTATTACAACGACACCAGATTGGAT 82777 || |||| |||| ||| || || |||||||||| || |||| || || ||| Sbjct 57898 GTCTGGACATTGG-TGGGGCCGTTGTCGAGAAGCTAGCTTTTAACGCCATTCGACCAGAT 57840 Query 82778 CATAAAGTCGAGAACCGTTTGGCCGAAGGGGGTAAGAAAGCATGAA 82823 || || || ||||||||| |||| ||||| || || || || |||| Sbjct 57839 CACAAGGTTGAGAACCGTCTGGCAGAAGGTGGGAAAAAGGCGTGAA 57794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313031746614125