Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 3e-14 seq199 93.3 1e-13 >seq3 Length=41204908 Score = 95.1 bits (104), Expect = 3e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920 || || || || || || ||||| || || ||||| || || ||||| | || ||| Sbjct 34261192 CTCGTCGCCTTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGCTTCTGCTCGATATTT 34261251 Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980 ||||| ||||||||||| |||||||| || ||| | || ||||| || |||||||| || Sbjct 34261252 TGGCTCAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAACTCATCTCGCGA 34261311 Query 131981 GATGAAG 131987 ||||||| Sbjct 34261312 GATGAAG 34261318 >seq199 Length=701003 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/184 (73%), Gaps = 10/184 (5%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||||||| || | ||||| |||||| | || || || ||||||||||| Sbjct 618354 CATTTGAATGATGGAGACTTTGTTCTCTTCAATCGTCAGCCTAGTCTTCATAAAATGTCC 618413 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAA--TGTAAG 305424 || |||| |||| | ||||| || || | ||| ||||| ||| | || ||| | Sbjct 618414 ATCATGGGGCATAGAATCAAA--ATCATGCCATATTCTACATTCCGACTTAACTTGTCTG 618471 Query 305425 TG-CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483 | ||| | || |||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct 618472 TAACTT---CACCATATAATGCTGATTTTGATGGGGATGAAATGAATATGCATGTTCCTC 618528 Query 305484 AATC 305487 | || Sbjct 618529 AGTC 618532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186244474292375