Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 seq109 93.3 3e-14 seq6 91.5 1e-13 seq3 91.5 1e-13 >seq1 Length=42234885 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||||||| | ||||| || |||||| || ||||| ||||||||||| | Sbjct 37703214 CCCCCCCTCAAACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCA 37703273 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | |||| || | |||||| || || ||||||| | ||||||||| | || Sbjct 37703274 AGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGG 37703333 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||||||| || || ||| |||| || | ||| ||| |||||||| Sbjct 37703334 ATACCTTCTTTGTCCTGGATCTTAGCCTTC-ACATTATCAATGGTATCGGAGGATTCCAC 37703392 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || ||||| || ||||| ||||| Sbjct 37703393 CTCGAGTGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | || | ||| | || |||||| || ||||| ||||||||||| | Sbjct 37707404 CCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGCA 37707463 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | ||| || || ||||| || | | |||||| || | || Sbjct 37707464 AGAGTGCGACCATCCTCGAGTTGCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 37707523 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACG 33702 | ||| || ||||| ||| || ||||| || | ||||||| ||||| || Sbjct 37707524 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACGTTATCAATGGTGTCGGAGGATTCAACC 37707583 Query 33703 TCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| ||||| || || || ||||| || || |||||||| Sbjct 37707584 TCAAGGGTGATGGTTTTGCCGGTCAAAGTTTTCACGAATATCTGCAT 37707630 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || || || | |||||| || || ||| ||| || || || |||||||||| Sbjct 37712880 ACCACCCCTTAACCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGC 37712939 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || || | ||||| || |||||||||| | |||||||| | || Sbjct 37712940 AAGGGTTCTCCCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGAGG 37712999 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||| |||||||| || || || | ||| ||| |||||| ||||| | Sbjct 37713000 GATACCCTCTTTGTCCTGGATCTTAGCCTTGA-CATTATCAATGGTGTCAGACGATTCTA 37713058 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| || || || || || || || ||||| |||||||||||||| Sbjct 37713059 CTTCAAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 37713107 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| | ||||||||| || ||| ||| || || || |||||||| | Sbjct 37707176 CCGCCTCTCAAACGAAGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCA 37707235 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || || | |||||| || || ||||||| | |||||| ||| | || Sbjct 37707236 AGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGGG 37707295 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | || |||||||| || || | | |||| || | |||||| ||| || Sbjct 37707296 ATGCCCTCTTTGTCTTGGATCTT-GGCCTTTACATTATCAATGGTGTC---TGAACTCTC 37707351 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| || || ||||| || || || || || |||||||| ||||| Sbjct 37707352 GACCTCAAGGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37707402 >seq109 Length=622178 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || ||| ||| || || |||||||| || | || ||||| | || ||| Sbjct 289715 ACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGACCATCCTCC 289774 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| || ||||| || |||||||||||||| ||| | || | ||||| ||||| | Sbjct 289775 AGTTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 289834 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| | | || | ||| | ||||||| ||||| || | || || || || Sbjct 289835 ATTTT-GGCCTTTACGTTGTCGATGGTGTCGGAACTCTCCACCTCGAGAGTTATGGTCTT 289893 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || || || || || ||||| ||||| Sbjct 289894 ACCAGTCAAGGTCTTAACGAAGATTTGCAT 289923 >seq6 Length=19356003 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| |||||| || |||||||| || | ||| ||||| |||| || | ||| Sbjct 11947041 TGGAGAGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCGTCCTCGAGTTGC 11947100 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| || || || | |||||||||||| | || | || || ||||| || || Sbjct 11947101 TTTCCTGCGAAGATGAGACGCTGCTGATCCGGTGGGATGCCCTCCTTGTCCTGGATCTT- 11947159 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | |||||| || ||||| |||| ||||| || || || || Sbjct 11947160 AGCCTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGT 11947219 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || || |||||||| Sbjct 11947220 AAGGGTTTTCACGAATATCTGCAT 11947243 >seq3 Length=41204908 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| |||||| || |||||||| |||| ||| ||||| |||| || | || Sbjct 288776 TGGAGAGTGGACTCTTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGC 288717 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| || || || | ||||||||||||| | || | || || ||||| || || Sbjct 288716 TTTCCTGCGAAGATGAGACGCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATCTT- 288658 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| || | |||||| || ||||| |||| ||||| || || || || Sbjct 288657 GGCCTTGACATTATCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGT 288598 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTGGTG 33757 | ||||| || || |||||||| | || || Sbjct 288597 AAGGGTTTTCACGAATATCTGCATCGCTGCTG 288566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328554272760000