Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 5e-11 >seq3 Length=41204908 Score = 84.2 bits (92), Expect = 5e-11 Identities = 101/135 (75%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 299037 GGTGCATTGACTGCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTG 299096 |||||| ||| ||||||| | ||||| ||||| ||||||||||| | | | | || Sbjct 1920546 GGTGCACTGATTGCTGGTGCAAAGTACCGTGGAGAATTTGAAGATAGGCTGAAAGCTGTG 1920605 Query 299097 CTAAAAGAACTAA-AGAAAC--GTGAAAATACTATTGTTTTCATTGATGAAATTCATATT 299153 || |||||| ||| |||| | || | ||||| ||||||||||||| ||||||| | Sbjct 1920606 CTTAAAGAAGTAACAGAATCTGATGGTCAGACTATCCTTTTCATTGATGAGATTCATACT 1920665 Query 299154 ATGGTTGGGGCTGGT 299168 | |||||||| ||| Sbjct 1920666 GTTGTTGGGGCAGGT 1920680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1114637181103875