Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq37374 533 4e-147 seq6 242 1e-59 seq5 120 9e-23 seq456 95.1 4e-15 >seq37374 Length=151683 Score = 533 bits (590), Expect = 4e-147 Identities = 710/971 (73%), Gaps = 18/971 (2%) Strand=Plus/Minus Query 19526 ACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 19585 ||| | || |||||||| |||| |||||||| |||||||||| | | | | Sbjct 4291 ACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACT 4232 Query 19586 GCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCAT 19644 || || |||| || ||||| || || || || || || ||||| || |||||||| || Sbjct 4231 GCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTAT 4173 Query 19645 CCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGT 19704 || || || || || || || |||||||||||||| ||||| || || || | | Sbjct 4172 TCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTAT 4113 Query 19705 TCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTT 19762 ||| | | || || || || | || || || || || |||||||| ||| || Sbjct 4112 TCCTACTTCTGCG--GCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTT 4055 Query 19763 GATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGC 19822 ||||||||| | |||||||| || || | |||| | || | |||||| | |||| Sbjct 4054 GATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGT 3995 Query 19823 AT--CTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTT 19880 | || |||| ||||||| || |||||||||||||| | ||| || || ||| | |||| Sbjct 3994 GTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTT 3937 Query 19881 GGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTAC 19939 ||||| |||||| || || ||||| ||||||||||| |||| || ||||| | |||| Sbjct 3936 GGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGT-TTTCTTGATCTAT 3878 Query 19940 CCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAAC 19999 || ||||||| || ||||| || |||| ||||||| | || || || ||||| ||||| Sbjct 3877 CCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAAT 3818 Query 20000 TACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGT 20059 | ||| | ||||| || || || ||||| ||||| ||||| || || |||||| | ||| Sbjct 3817 TTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGT 3758 Query 20060 GTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCC 20119 || |||||||||||||| || || ||||||||||| ||||| ||||| |||| || | | Sbjct 3757 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTC 3699 Query 20120 TCGCTTG-TGCGTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGG 20176 | | ||| | | || || || ||| | ||| || | || | ||||||| ||||| Sbjct 3698 TAGTTTGATCAGGGAAACCACAGAAAATGAA--TCCGCTAATGAAGGTTACAGATTTGGT 3641 Query 20177 CAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTC 20236 ||||| ||||| || ||||| || ||||| ||||||||||| ||||| || ||||||||| Sbjct 3640 CAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTC 3581 Query 20237 CAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTG 20296 ||||| || |||||||||| |||||| |||| |||||||| ||||| ||||| || Sbjct 3580 CAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTA 3521 Query 20297 GTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTC 20356 ||||| |||||||| | || || || | || ||||| || || | || ||||| Sbjct 3520 GTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTT 3461 Query 20357 AACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATT 20416 || || ||||| ||| | | || | | |||||||| || |||| |||||||| ||| Sbjct 3460 AATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATT 3401 Query 20417 CTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCA 20476 | || || ||||| || || | || || ||||||||||| ||||||||||| ||||| Sbjct 3400 ATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCT 3341 Query 20477 CTTGACCTTGC 20487 || || || || Sbjct 3340 CTAGATCTAGC 3330 >seq6 Length=19356003 Score = 242 bits (268), Expect = 1e-59 Identities = 306/418 (73%), Gaps = 2/418 (0%) Strand=Plus/Plus Query 20059 TGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTC 20118 ||| |||||||||||||| || || ||||||||| | ||| | ||||| |||| || | Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTC-CTTGGTAACTT 3410831 Query 20119 CTCGCTTG-TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGC 20177 || | ||| | | || || || ||| | ||| | || | |||||||| ||||| | Sbjct 3410832 CTAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTC 3410891 Query 20178 AAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCC 20237 |||||||||| || ||||| || ||||| ||||||| || ||||| || |||||||||| Sbjct 3410892 AAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCC 3410951 Query 20238 AATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGG 20297 |||| || |||||||||| |||||| ||| |||||||| ||||| ||||| | | Sbjct 3410952 AATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 20298 TAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCA 20357 |||| |||||||| | || || || | || |||| || || | || ||||| | Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 20358 ACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTC 20417 | || ||||| ||| | | || | | |||||||| || |||| |||||||| ||| Sbjct 3411072 ATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTA 3411131 Query 20418 TCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCC 20475 | || || ||||| || || | || || ||| ||||||| ||||||||||| || || Sbjct 3411132 TTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq5 Length=30687117 Score = 120 bits (132), Expect = 9e-23 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221 ||||||| ||||| ||||| ||||| || ||||| || | | | ||||||||||| ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTT 20281 || || |||||||||||||| | |||||| | | |||| | |||| ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 20282 GCTGCCTGGCCGGTGGTAGGGATTTGGTT 20310 ||||| ||||| || ||||| |||||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTT 28538891 >seq456 Length=558995 Score = 95.1 bits (104), Expect = 4e-15 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 20214 GTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACT 20273 |||| ||||| || |||||||||||||| || |||||||||| |||||| |||| | Sbjct 484667 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATT 484726 Query 20274 TCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 20308 ||||||| ||||| ||||| || ||||| |||||| Sbjct 484727 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148762745592750