Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq37374 509 5e-140 seq6 237 5e-58 seq5 129 2e-25 seq456 95.1 4e-15 >seq37374 Length=151683 Score = 509 bits (564), Expect = 5e-140 Identities = 703/970 (72%), Gaps = 14/970 (1%) Strand=Plus/Minus Query 28654 ACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 28713 ||| | || |||||||| |||| |||||||| |||||||||| | | | | Sbjct 4291 ACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACT 4232 Query 28714 GCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCAT 28772 || || |||| || ||||| || || || || || || ||||| || |||||||| || Sbjct 4231 GCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTAT 4173 Query 28773 CCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGT 28832 || || ||||| ||||| ||| || ||||||||||| ||||| || || || | | Sbjct 4172 TCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTAT 4113 Query 28833 ACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTT 28890 || | | || || || || | || || || || || |||||||| ||| || Sbjct 4112 TCCTACTTCTGCG--GCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTT 4055 Query 28891 GATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGC 28950 ||||||||| | |||||||| || || | |||| | || | |||||| | |||| Sbjct 4054 GATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGT 3995 Query 28951 GT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGT 29008 || || |||| ||||||| || |||||||||||||| | ||| || || ||| | || | Sbjct 3994 GTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTT 3937 Query 29009 GGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACC 29068 ||||| ||| ||||| |||||||| || ||||| || |||| |||||| | |||| | Sbjct 3936 GGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATC 3877 Query 29069 CATTCGGTCAAGGTT-CTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAAC 29127 | | |||||||| ||||| | || | |||||| | || ||||| || || ||||| Sbjct 3876 CTATTGGTCAAGGAAGCTTTTCG-GATGGTATGCCTCTAGGAATTTCTGGTACTTTCAAT 3818 Query 29128 TACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGC 29187 | ||| | || || || || || ||||| ||||| ||||| || || |||||| | || Sbjct 3817 TTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGT 3758 Query 29188 GTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCC 29247 || ||||| || ||||| ||||| ||||| ||||| ||||| ||||| | || || || Sbjct 3757 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC- 3699 Query 29248 TCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACA 29306 | | ||| | | || || || ||| | || || | ||||||| ||||| || Sbjct 3698 TAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCA 3639 Query 29307 AGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCA 29366 ||| ||||| |||||||| || ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 3638 AGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCA 3579 Query 29367 ATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGT 29426 |||||| |||||| ||| |||||| |||| |||||||| ||||| ||||| || || Sbjct 3578 ATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGT 3519 Query 29427 AGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAA 29486 ||| |||||||| | || || || | || ||||| || || | || |||||||| Sbjct 3518 AGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAA 3459 Query 29487 CTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCT 29546 || ||||| || | | || | | |||||||| || ||||| ||||||||| || | Sbjct 3458 TTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTAT 3399 Query 29547 CAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACT 29606 || || |||||||| || | |||||||||||||| |||||||||||||| ||||| || Sbjct 3398 TAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCT 3339 Query 29607 TGATCTGGCT 29616 ||||| ||| Sbjct 3338 AGATCTAGCT 3329 >seq6 Length=19356003 Score = 237 bits (262), Expect = 5e-58 Identities = 312/430 (73%), Gaps = 2/430 (0%) Strand=Plus/Plus Query 29188 GTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCC 29247 || ||||| || ||||| ||||| ||||| ||| | ||| | ||||| | || || || Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC- 3410832 Query 29248 TCGCTTG-TGCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACA 29306 | | ||| | | || || || ||| | | | || | |||||||| ||||| || Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 29307 AGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCA 29366 ||||||||| |||||||| || ||||| ||||| | || ||||| || ||||||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 29367 ATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGT 29426 |||||| |||||| ||| |||||| ||| |||||||| ||||| ||||| | || Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 29427 AGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAA 29486 ||| |||||||| | || || || | || |||| || || | || |||||||| Sbjct 3411013 AGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAA 3411072 Query 29487 CTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCT 29546 || ||||| || | | || | | |||||||| || ||||| ||||||||| || | Sbjct 3411073 TTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTAT 3411132 Query 29547 CAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACT 29606 || || |||||||| || | ||||||||| |||| |||||||||||||| || || | Sbjct 3411133 TAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTT 3411192 Query 29607 TGATCTGGCT 29616 ||| | ||| Sbjct 3411193 AGATTTAGCT 3411202 >seq5 Length=30687117 Score = 129 bits (142), Expect = 2e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 ||||||| ||||| ||||| ||||| |||||||| || | | | ||||| ||||| ||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTT 29409 || || ||||||||||||||| | |||||||| | |||| | |||| ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 29410 GCTGCCTGGCCGGTGGTAGGGATTTGGTT 29438 ||||| ||||| || ||||| |||||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTT 28538891 >seq456 Length=558995 Score = 95.1 bits (104), Expect = 4e-15 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 29342 GTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACT 29401 |||| ||||| || ||||||||||||||||| |||||| ||| |||||| |||| | Sbjct 484667 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATT 484726 Query 29402 TCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 29436 ||||||| ||||| ||||| || ||||| |||||| Sbjct 484727 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146600505681750