Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq37374 625 9e-175 seq6 288 3e-73 seq5 122 2e-23 >seq37374 Length=151683 Score = 625 bits (692), Expect = 9e-175 Identities = 739/990 (75%), Gaps = 12/990 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| | ||| ||||||| || || || |||||||| || || |||||||| || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 |||||||| | | | | || ||| | ||| || ||||| || || || ||||| || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || ||||||||| | || ||| |||||||||||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 ||||| || || || | |||| | | || || || || | || || || || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCG--GCTATAGGTTTGCATTTTTATCCG 4076 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || |||||||| ||| ||||||||||| | |||||||| || || | |||| | Sbjct 4075 ATATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATT 4016 Query 19021 GTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCT 19078 || | |||||| | |||| || || |||| ||||||| || |||||||||||||| | Sbjct 4015 GTTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTT 3958 Query 19079 ATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCT 19138 ||| || || ||||| ||||||||| |||||| || |||||||||||||| || || Sbjct 3957 TTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTA 3898 Query 19139 CTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGG 19198 |||| || ||| | ||||||| |||||||||| |||| || | ||||||| | | Sbjct 3897 CTGCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAG 3838 Query 19199 GTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGC 19258 | ||| |||||| ||||| | ||| ||||||| |||||||| ||||| || || |||| Sbjct 3837 GAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGC 3778 Query 19259 ACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGC 19318 | || || |||||| | ||||| |||||||| |||||||| || ||||| ||||| |||| Sbjct 3777 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGC 3718 Query 19319 ACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAAC 19377 | ||||| |||| || | || | ||| | | ||||| || ||| | | ||| || Sbjct 3717 ATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAAT 3659 Query 19378 TATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTAT 19437 | || |||| ||||| ||||| ||||| |||||||| ||||| ||||||||||| ||| Sbjct 3658 GAAGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTAT 3599 Query 19438 TTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTT 19497 ||||| || | || ||||| || ||| ||||||||| |||||| |||||||||| Sbjct 3598 TTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTC 3539 Query 19498 TTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCA 19557 | |||||||||||||| || || ||||||||| |||| | || | ||||| ||||| Sbjct 3538 CTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCT 3479 Query 19558 TTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATT 19617 |||||||| ||||| ||||| || ||||| ||| | |||| | | |||||||| || Sbjct 3478 TTCAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATA 3419 Query 19618 GATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGT 19677 |||| |||||||| ||| | || || |||||||| || | || |||||||| |||||| Sbjct 3418 AATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGT 3359 Query 19678 AATGCTCATAACTTCCCACTTGATTTGGCT 19707 ||||||||||| ||||| || ||| | ||| Sbjct 3358 AATGCTCATAATTTCCCTCTAGATCTAGCT 3329 >seq6 Length=19356003 Score = 288 bits (318), Expect = 3e-73 Identities = 324/431 (75%), Gaps = 2/431 (0%) Strand=Plus/Plus Query 19278 TGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTC 19337 ||| |||||||| |||||||| || ||||| ||| | ||| | ||||| |||| || | Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTC-CTTGGTAACTT 3410831 Query 19338 CTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGC 19396 || | ||| | | ||||| || ||| | | || | || | || ||||| ||||| | Sbjct 3410832 CTAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTC 3410891 Query 19397 AAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCC 19456 |||||||||| |||||||| ||||| |||||||||| |||||||| || | || |||| Sbjct 3410892 AAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCC 3410951 Query 19457 AGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGG 19516 | || ||| ||||||||| |||||| ||| |||||| | |||||||||||| | | Sbjct 3410952 AATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 19517 TTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTA 19576 | || ||||||||| |||| | || | ||||| |||| |||||||| ||||| |||| Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTA 3411071 Query 19577 ACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTC 19636 | || ||||| ||| | |||| | | |||||||| || |||| |||||||| ||| Sbjct 3411072 ATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTA 3411131 Query 19637 TCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCAC 19696 | || || |||||||| || | || |||||| | ||||||||||||||||| || || Sbjct 3411132 TTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTT 3411191 Query 19697 TTGATTTGGCT 19707 | ||||| ||| Sbjct 3411192 TAGATTTAGCT 3411202 >seq5 Length=30687117 Score = 122 bits (134), Expect = 2e-23 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 19381 GGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTT 19440 || |||| ||||| ||||| ||||| |||||||| |||| |||||||||| |||||| Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 19441 GGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTG 19500 || || | || ||||| || || ||||| | | |||| | ||||||||||| | Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 19501 GCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGC 19535 |||||||||||||| || || ||||||||| |||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141086154192750