Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=42234885 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA-AGCCA 25232 ||||||| | ||||| || || || ||||| ||| | || || | || ||||| || Sbjct 37707403 CATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACCATTACCCTTGAGGTCGAGAGTTC 37707344 Query 25233 ACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | || || || || | ||||| || || || |||||||| || || || || | Sbjct 37707343 A-GACACCATTGATAATGTAAAGGCCAAGATCCAAGACAAAGAGGGCATCCCTCCAGACC 37707285 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACA 25352 |||| || || |||| || || ||||||||||| |||| |||| | ||||||| Sbjct 37707284 AGCAGAGGCTGATTTTCGCTGGGAAACAACTCGAGGATGGAAGAACCCTTGCTGATTACA 37707225 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||||| || || |||||| | ||||| ||| | | |||||||| || Sbjct 37707224 ATATTCAGAAGGAGTCCACCCTCCATTTGGTGCTTCGTTTGAGAGGCGG 37707176 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 25156 TAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCAC 25215 |||||| ||| |||| ||||| | ||||| ||||| || || || || | || || Sbjct 37713125 TAGTTTCTGATTGAACAG-ATGCAGATCTTTGTGAAAACTTTGACTGGCAAGACCATAAC 37713067 Query 25216 GATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGA 25275 | ||||| ||| | || || || || | || || || || || ||||| Sbjct 37713066 CCTTGAAGTAGAATCGTCTGACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGA 37713007 Query 25276 GGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 25335 |||||| || || ||||||||||| || |||| | || ||||| || || |||| || Sbjct 37713006 GGGTATCCCTCCGGATCAGCAAAGGCTGATTTTTGCTGGTAAACAGCTTGAGGATGGGAG 37712947 Query 25336 AAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 || | ||||||||||||||| || || |||||| | || || ||| Sbjct 37712946 AACCCTTGCCGATTACAATATTCAGAAGGAGTCCACCCTCCACTTGGTG 37712898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444886457460000