Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 338 9e-87 >seq3 Length=41204908 Score = 338 bits (374), Expect = 9e-87 Identities = 435/593 (73%), Gaps = 13/593 (2%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 ||||| || ||| | ||||| ||||||| | ||||||| |||| |||| | Sbjct 34260730 GAGCCACTCCTGGCCCCGAACCCCGACCGCTTCTGCATGTTCCCAATCCAATACCCCCAA 34260789 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || |||||||||||| | |||| |||| || || || ||||||||||| ||||| ||||| Sbjct 34260790 ATCTGGGAAATGTACAAGAAAG-CCGAAGCTTCTTTCTGGACCGCCGAAGAGGTTGACCT 34260848 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 | | ||| |||||||| || || | ||||| ||||||||| ||||||| || Sbjct 34260849 CTCCCAAGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCA 34260908 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 | |||||||||| ||| |||||| ||| |||||||| ||| ||||| || | ||||| Sbjct 34260909 CATCCTCGCCTTCTTT-GCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCTGCCCGCT 34260967 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | ||||| || ||||| | ||||| ||| || ||||| |||||||||||||||| Sbjct 34260968 TCATGAAGGAAATCCAAGCCGCCGAGGCTCGTGCTTTCTACGGCTTCCAGATCGCCATCG 34261027 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075 | ||||||||||| || | ||| ||||| | || |||||| |||| ||| | || Sbjct 34261028 AGAACATCCACTCCGAGATGTACAGTCTCCTCTTGGAAACCTACATCAAAGACTCCACCG 34261087 Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 | ||| | ||||| || |||||| |||| || | || | || || |||||| | | Sbjct 34261088 AAAAGAATCACCTGTTCCGCGCCGTCGATACCATCCCCTGTGTCGCCAAGAAGGCCCAAT 34261147 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGAC-ACTTTGCCGAGCGGCTCGTCGGCT 1456194 |||| || |||||| || | | |||| ||| |||||||| ||||||| || Sbjct 34261148 GGGCCTTGCGCTGGATC------GATGCCACCGACTCCTTCGCCGAGCGCCTCGTCGCCT 34261201 Query 1456195 TTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 | ||| |||| ||||| ||||| ||||| ||||| |||||| | || ||||||||||||| Sbjct 34261202 TCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGCTTCTGCTCGATATTTTGGCTCAAGA 34261261 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGA 1456306 |||| ||| | |||||||||| || ||| ||||||| | ||| |||||| Sbjct 34261262 AGCGTGGCTTGATGCCCGGTC-TCACCTTCTCCAACGAACTCATC--TCGCGA 34261311 Score = 325 bits (360), Expect = 6e-83 Identities = 417/562 (74%), Gaps = 17/562 (3%) Strand=Plus/Minus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| |||| |||| | || |||||||||||| | |||| | || ||||| || Sbjct 26200913 TGTTCCCTATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAG-CAGAAGCCTCGTTC 26200855 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCG-ACA-CGGTCCACTGGGTGTCGCTGAGCG 1455870 ||||| || |||||||| |||||| ||| | ||| | ||| ||||| | || | || Sbjct 26200854 TGGACGGCGGAGGAGGTGGACCTCT-CGCAGGACATCAGTC-ACTGGAACACTCTTACCG 26200797 Query 1455871 ACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATC 1455930 ||| ||||||||||||| ||| || ||||||||||| || ||||||| ||| |||||| Sbjct 26200796 ACGGCGAGCGCCATTTCGTCACCCATGTCCTCGCCTTCTT-CGCCGCCTCCGACGGCATC 26200738 Query 1455931 GTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTG 1455990 || || ||||| |||||||| |||||||| |||||||| | | ||||| || Sbjct 26200737 GTACTAGAAAACCTTGCCGGCCGTTTTATGAAGGAGGTCCAGGTCTCCGAGGCTCGCGCC 26200678 Query 1455991 TTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATC 1456050 |||||||| ||||||||||| ||||| ||||| ||||| || | ||| ||||| || Sbjct 26200677 TTTTACGGCTTCCAGATCGCTATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTC 26200618 Query 1456051 GACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTG 1456110 || |||||| | || ||| | || ||||| || ||||||| |||||| ||||| | Sbjct 26200617 GAAACCTACATAAAAGACTCCGTAGAGAAAACCCGTCTCTTTCACGCCATTGACACCATT 26200558 Query 1456111 CCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCT-CGA 1456169 || | || | || |||||| ||||||| | |||||| || ||| ||| Sbjct 26200557 CCCTGCGTCACCAAGAAGGCCAACTGGGCCCTCCGCTGGATCGAC-------TCCTCCGA 26200505 Query 1456170 -CACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAG 1456227 ||| |||||||| ||||||| ||||||| |||||||||| ||||| ||||| || || Sbjct 26200504 GTCCTTCGCCGAGCGCCTCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAG 26200445 Query 1456228 TTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCA 1456287 || ||| ||||||| ||||||||||| || ||||||||||| || | || || || Sbjct 26200444 CTTTTGCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGAC-TCACTTTCTCCA 26200386 Query 1456288 ACGAATTTATCAGTCGCGACGA 1456309 ||||| | ||| |||||||| Sbjct 26200385 ACGAACTCATCTCCCGCGACGA 26200364 Score = 96.9 bits (106), Expect = 5e-14 Identities = 169/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 ||| || || || ||||||| ||||| ||| |||| |||| || ||| | | || Sbjct 26200279 CGATGCTGTGGACATCGAGAGGGAGTTCGTCTGCGACGCGCTTCCTTGTGCGTTGGTGGG 26200220 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||| || | ||| | ||||||||||| ||| || || || | |||||| Sbjct 26200219 GATGAACGGGGCCT-TGATGAGTCAGTACATTGAGTTT-GTTGCTGATAGGTTGCTCGGT 26200162 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACC--GGACGGCCAACCCGTTCCCATGGATGGAGTTG 1456708 || || || ||||| |||| ||| | || | ||||| ||| ||||||||| || Sbjct 26200161 GCCCTTGGGTGCGG-GAAGGTGTACAATGTACAG--AACCCATTCGATTGGATGGAGCTG 26200105 Query 1456709 ATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGC 1456766 || ||||| |||| ||||||||||| |||||| ||||| || |||||| ||||| Sbjct 26200104 ATTTCGCTGCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTGGGGGAGTACCAGAAGGC 26200046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174206312554750