Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq37374 529 2e-145 seq6 219 5e-52 seq9 179 4e-40 seq5 104 3e-17 seq456 82.4 8e-11 >seq37374 Length=151683 Score = 529 bits (586), Expect = 2e-145 Identities = 719/992 (72%), Gaps = 12/992 (1%) Strand=Plus/Minus Query 158379 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 158438 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 158439 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 158497 |||||||| ||| | ||| | ||||| ||||| || || |||| || ||||||| || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 158498 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 158557 || || || || || || || ||||| || || |||| || || | ||||| ||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 158558 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 158617 ||||| |||||||| || | || |||| || || ||| | || || ||||| || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 158618 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 158677 |||||||| || || ||||||| ||| | || ||||| ||||||| |||| | || Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 158678 CTTTCACTTCCTTATCGGCAT--CTATGCATATATGGGACGTGAATGGGAACTTTCATAC 158735 | |||||| | | || | || ||| || ||||| ||||| ||||||||| | Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTT 3956 Query 158736 CGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCT 158795 || | |||||||| || ||||| ||| |||||||| || || || || || || || Sbjct 3955 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACT 3896 Query 158796 GCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGT 158855 ||||| ||| | |||||||| | |||||||| || || |||| ||||||||| || Sbjct 3895 GCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGA 3836 Query 158856 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCAC 158915 || ||||||||||| || | ||| ||||||| || || || || || || |||||||| Sbjct 3835 ATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCAT 3776 Query 158916 CCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCAT 158975 || || || ||| | ||||| ||||| |||||||| || || || ||| |||||||||| Sbjct 3775 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 3716 Query 158976 GGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTA 159034 || | || ||||| | | | || | ||||| || |||| || || || | Sbjct 3715 GGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGA 3657 Query 159035 TGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTT 159094 ||||||| || || ||||| |||||||| |||||||| || || || |||||||| || Sbjct 3656 AGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTT 3597 Query 159095 CGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCT 159154 || || |||||||||||||| || |||||||| || ||||| || || |||||||| Sbjct 3596 TGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 3537 Query 159155 TGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCA 159212 ||||| |||||||| || || || ||||| ||||| | || | ||| || ||||| Sbjct 3536 AGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGG--TATCAGCACTATGGCT 3479 Query 159213 TTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTG 159272 |||||| | || ||||| || |||||||| ||| | ||||| |||| |||||||| | Sbjct 3478 TTCAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATA 3419 Query 159273 AACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGT 159332 || |||||||| ||| | | ||||| || || ||||||||||| |||||||| ||| Sbjct 3418 AATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGT 3359 Query 159333 AACGCACACAACTTCCCACTCGACCTTGCTGC 159364 || || || || ||||| || || || ||||| Sbjct 3358 AATGCTCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 489 bits (542), Expect = 2e-133 Identities = 726/1021 (71%), Gaps = 6/1021 (1%) Strand=Plus/Minus Query 159899 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 159958 ||||| || | || |||||| | |||| |||||||||||||| || ||||| || Sbjct 31161 TTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGT 31102 Query 159959 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTTTC 160018 || | || |||| || ||| | || | || |||||| |||| || || || || Sbjct 31101 CTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTT 31042 Query 160019 GCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGG-TGCAAACTTTCT 160077 | ||| |||||||| || || | || ||||| ||| | || || ||||| ||| | Sbjct 31041 GTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAA-CTTCTT 30983 Query 160078 TACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 160136 || || ||||| |||||| ||| | | | | || ||| || || || || |||| Sbjct 30982 AACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCT-TTGTTGTTACTGTGGG 30924 Query 160137 GTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTG 160196 ||||||| || || || ||||| | | ||| || | || || || |||| ||||| Sbjct 30923 GTCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTG 30864 Query 160197 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 160256 | || ||||| ||||| |||| |||| || |||||| | ||||| |||||||| || | Sbjct 30863 TTGCTCTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 30804 Query 160257 G-TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTT 160315 | ||| || | | || ||||| ||||| || || ||||| ||||| |||||||| ||| Sbjct 30803 GATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCAGGTCCAATTGCTGTTTTT 30745 Query 160316 GTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTT 160375 || ||||| || || || ||| |||||||||| ||||||| || ||||| ||| Sbjct 30744 GTTTCTGTATTTCTTATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTT 30685 Query 160376 GGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTT 160435 || || ||||| || ||| ||||| | | || | ||||||||||| || ||||| | Sbjct 30684 GGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTA 30625 Query 160436 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATC 160495 ||||| || ||||||||||||||||||||| || | || | ||||| || | || || Sbjct 30624 AACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCACTACTATGCGCTATT 30565 Query 160496 CATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAG 160555 ||||| | || ||||| || || | | ||||||||| || |||||||| || Sbjct 30564 CATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 30505 Query 160556 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 160615 || ||| | | || || | ||||| |||||||| ||||| ||||| || ||||| ||| Sbjct 30504 GCTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTTACTGCTAATCGCTTTTGG 30445 Query 160616 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 160675 || || ||||| || |||| ||||| || || || ||| | ||||| || ||||| ||| Sbjct 30444 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 30385 Query 160676 GTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTT 160735 || || || | ||| | |||| | |||| | | ||| | || || || | Sbjct 30384 GTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCCCTGAACTTA 30325 Query 160736 CGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAGACC 160795 |||||||| || ||||| |||||| || | ||||| |||||||| ||||||||||| Sbjct 30324 CGTGCTTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAATTTGAGACT 30265 Query 160796 TTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCCGAC 160855 ||||||||||| || || || | || ||||| | ||||| ||| | ||| || || Sbjct 30264 TTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGCAGCTCAAGAT 30205 Query 160856 CAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAA 160915 || || ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||| Sbjct 30204 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 30145 Query 160916 T 160916 | Sbjct 30144 T 30144 >seq6 Length=19356003 Score = 219 bits (242), Expect = 5e-52 Identities = 301/419 (72%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 158933 TGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTC 158992 ||| ||||| |||||||| || || || ||| | ||||| |||| | || ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 158993 CTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACA 159052 | | | ||||| || |||| || | || | |||||||| || || || Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 159053 AGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCA 159112 |||||||||||| |||||||| || || || |||| || || || || ||||||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 159113 ATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGT 159172 ||| || |||||||| || ||||| || | |||||||| ||||| |||||| | || Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 159173 CGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTC 159230 || || ||||| |||| ||| || ||| || |||| |||||| | || ||||| Sbjct 3411013 AGGTATTTGGTTTACCG--CTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTT 3411070 Query 159231 AACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTA 159290 || |||||||| ||| | ||||| |||| |||||||| | || |||||||| ||| | Sbjct 3411071 AATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATT 3411130 Query 159291 CTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCC 159349 | ||||| || || ||||||||||| ||| |||| ||||| || || || || || Sbjct 3411131 ATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq9 Length=31747250 Score = 179 bits (198), Expect = 4e-40 Identities = 227/312 (73%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 160343 GGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTG 160402 |||||||| ||||||| || ||||| ||||| || ||||| || ||| ||||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 160403 TTGTTCCTTCAAGGATTTCACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTTGCT 160462 | || | ||||||||||| || ||||| | ||||| || |||||||||||||||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 160463 GGTATACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTG 160522 ||| || | || | ||||| || | || || ||||| | || ||||| || || | Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 160523 TATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAG 160582 | ||||||||| || |||||||| || || ||| | | || || | ||| | Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 160583 ACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCT 160642 |||||||| ||||| ||||| || ||||| ||||| || ||||| || |||| ||||| Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 160643 AACAAGCGGTGG 160654 || || || ||| Sbjct 26587302 AATAAACGTTGG 26587291 >seq5 Length=30687117 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095 ||||||| || || ||||| |||||||| |||||||| | | || |||||||| || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 159096 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 159155 || || |||||||||||||| | ||||| | | |||| || || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 159156 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGC 159190 ||||| |||||||| || || || ||||| ||||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 >seq456 Length=558995 Score = 82.4 bits (90), Expect = 8e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 159088 GTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACT 159147 |||| || || || |||||||||||||| || |||||||| || ||||| || || | Sbjct 484667 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATT 484726 Query 159148 TCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 159182 ||||||| ||||| |||||||| || || || ||| Sbjct 484727 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552215491240000