Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq37374 540 1e-148 seq9 197 2e-45 seq6 190 2e-43 seq5 84.2 3e-11 >seq37374 Length=151683 Score = 540 bits (598), Expect = 1e-148 Identities = 718/990 (73%), Gaps = 8/990 (1%) Strand=Plus/Minus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 ||||| | ||| |||| |||| | |||||| | || |||| ||||| ||||| || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979 ||||||||||| || | |||||||| ||||| || || | ||||| | || || || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039 ||| || |||||||| || || ||||| || || |||| || || | ||||||||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099 ||||| |||||||| || | || | ||| || || ||| | || || || || || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159 ||||||||||| || | ||||| ||| | || ||||| ||||||| |||| | || Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219 | |||||| | | || | | ||| ||||| ||||||||||||||| || || Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 3954 Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279 ||| ||||||||||| ||||| ||||||||| || || || || || || || | ||| Sbjct 3953 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGC 3894 Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339 || ||| | |||||||| | |||||||| || || |||| ||||||||| || || Sbjct 3893 TGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAAT 3834 Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399 ||||||||||| || | ||| ||||||| || || || || || || |||||||| || Sbjct 3833 TTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCC 3774 Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459 || || ||| | ||||| ||||| |||||||| || || || ||| ||||||||| || Sbjct 3773 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 3714 Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518 | || |||| || | ||| || | ||||| || || | || || || | | Sbjct 3713 TTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAG 3655 Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578 |||| | || || ||||| ||||| || ||||| || || || || ||||| || || | Sbjct 3654 GTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 3595 Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638 | || |||||||||||||||||| || ||||| || || ||||| || |||||||| | Sbjct 3594 GCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 3535 Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCA--ACCATGGCGTT 179696 |||| ||||| || || || || ||||| || ||| | | || ||| || ||||| || Sbjct 3534 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAG--GTATCAGCACTATGGCTTT 3477 Query 179697 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAA 179756 |||| | || ||||| || |||||||| ||| | |||| ||||||| ||||| | || Sbjct 3476 CAACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAA 3417 Query 179757 CACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAA 179816 || ||||| || | | ||||| || | ||||||||||| |||||||| ||||| Sbjct 3416 TACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAA 3357 Query 179817 CGCACACAACTTCCCACTCGACCTTGCTGC 179846 || || || ||||| || || || ||||| Sbjct 3356 TGCTCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 540 bits (598), Expect = 1e-148 Identities = 710/981 (72%), Gaps = 2/981 (0%) Strand=Plus/Minus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| || || |||||||| ||||| || ||| |||| |||| || ||| | ||| Sbjct 31131 GACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTTCCTTGCGCCTATTTCGCC 31072 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| |||| || || | ||||| || ||||| || ||||| | || Sbjct 31071 TTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGGTATACTCACGGCTTGGCA 31012 Query 180171 TCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGC 180229 ||| ||| | ||||| ||| ||||| | || || || || || || || ||| | Sbjct 31011 AGTTCTTATTTAGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAG 30953 Query 180230 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTG 180289 | | | || ||| | | |||| ||||||||||| | ||||| |||| || || Sbjct 30952 TTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTG 30893 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| || | || || || |||| ||| || |||||||||||||| |||| |||| || Sbjct 30892 GTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGG 30833 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTAT 180409 || ||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 30832 TTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAAT 30773 Query 180410 TGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCA 180469 |||||||| ||||| || ||||| ||||| |||||||| || || ||||||||||| Sbjct 30772 CGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTTATTTATCCACTGGGTCA 30713 Query 180470 GTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTT 180529 ||| |||||||||||||||| |||||| |||||||| || ||| ||||| | ||||| Sbjct 30712 GTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTT 30653 Query 180530 TCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTAT 180589 | | || || || || || ||||| | ||||| || ||||||||||||||||||||| | Sbjct 30652 TTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGT 30593 Query 180590 ACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGA 180649 | | || | ||| | |||| || || ||||| | ||| || || || || | | ||| Sbjct 30592 ATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTTGA 30533 Query 180650 AGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTA 180709 |||||| || ||||| || || || ||| | |||| |||| || |||||||| Sbjct 30532 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAACTTA 30473 Query 180710 CTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAA 180769 || ||||| ||||| || ||||| ||||| || ||||| || |||| ||||| || || Sbjct 30472 TTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAA 30413 Query 180770 GCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTAT 180829 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || | Sbjct 30412 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCT 30353 Query 180830 TGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAG 180889 ||| | | ||| | || || ||| | |||||||| || ||||| |||||| ||| | Sbjct 30352 TGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACTTCGTTTCTCAAGAAATCCG 30293 Query 180890 AGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGG 180949 ||||| ||||||||||| || ||||| ||||||||||| || || || || || ||||| Sbjct 30292 CGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGG 30233 Query 180950 ACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGA 181009 | ||||| ||| ||||| || ||||| || || |||||| | || |||||||| || Sbjct 30232 TATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 30173 Query 181010 AGTTCTACCAAGAGGTAACGC 181030 ||||||||| | || ||||| Sbjct 30172 GGTTCTACCACGTGGAAACGC 30152 >seq9 Length=31747250 Score = 197 bits (218), Expect = 2e-45 Identities = 231/312 (74%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 180465 GGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTA 180524 |||||||| |||||||||||||||| |||||| |||||||| || ||| ||||| | Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 180525 CTCTTTCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCT 180584 |||||| | || || || || || ||||| | ||||| || |||||||||||||||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 180585 GGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTG 180644 ||| || | || | ||| | |||| || || ||||| | ||| || || || || | Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 180645 TATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAA 180704 | ||||||||| || ||||| || || || ||| | |||| |||| || || Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 180705 ACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCT 180764 ||||| || ||||| ||||| || ||||| ||||| || ||||| || |||| ||||| Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 180765 AACAAGCGGTGG 180776 || || || ||| Sbjct 26587302 AATAAACGTTGG 26587291 >seq6 Length=19356003 Score = 190 bits (210), Expect = 2e-43 Identities = 297/420 (71%), Gaps = 6/420 (1%) Strand=Plus/Plus Query 179415 TGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTC 179474 ||| ||||| |||||||| || || || ||| | ||||| | || | || ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 179475 CTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGAC 179533 | | ||| | | ||||| || || | || | || | ||||| || || || | Sbjct 3410833 -TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTC 3410891 Query 179534 AAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCC 179593 |||||||||| || ||||| || || || || |||| ||| || || || |||||||||| Sbjct 3410892 AAGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCC 3410951 Query 179594 AATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTG 179653 |||||||| || ||||| || || ||||| | |||||||| ||||| ||||| | | Sbjct 3410952 AATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAG 3411011 Query 179654 TCGGCATCTGGTTCACTGCTCTTGGCGTGTCA--ACCATGGCGTTCAACCTCAACGGTTT 179711 | || || ||||| || ||| | | || ||| || |||| |||||| | || ||||| Sbjct 3411012 TAGGTATTTGGTTTACCGCTTTAG--GTATCAGCACTATGGTTTTCAACTTAAATGGTTT 3411069 Query 179712 CAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGT 179771 || |||||||| ||| | |||| ||||||| ||||| | || || ||||| || | Sbjct 3411070 TAATTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATAT 3411129 Query 179772 ATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCC 179831 | ||||| || | ||||||||||| ||| |||| ||||| || || || || || Sbjct 3411130 TATTAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 >seq5 Length=30687117 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 179518 GGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTC 179577 ||||| | || || ||||| ||||| || ||||| || | | || ||||| || || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 179578 GGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTT 179637 || || ||||||||||||||| || || || | | || | ||| || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 179638 GCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCT 179673 ||||| ||||| || || || || ||||| || ||| Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCT 28538898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610044461640000