Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 5e-11 >seq3 Length=41204908 Score = 84.2 bits (92), Expect = 5e-11 Identities = 101/135 (75%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 332165 ACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACAATAGTATTTTCAC--GTTTC 332222 ||| |||||||| | | ||||||| ||||||||||||| ||||| | || | ||| Sbjct 1920680 ACCTGCCCCAACAACAGTATGAATCTCATCAATGAAAAGGATAGTCTGACCATCAGATTC 1920621 Query 332223 T-TTAGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAATTCACCACGATACTTAGTACC 332281 | ||| |||||| |||| | | | | ||||||||||| ||||| ||||| | ||| Sbjct 1920620 TGTTACTTCTTTAAGCACAGCTTTCAGCCTATCTTCAAATTCTCCACGGTACTTTGCACC 1920561 Query 332282 AGCAGTCAATGCACC 332296 |||| ||| |||||| Sbjct 1920560 AGCAATCAGTGCACC 1920546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113297023169000