Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq5 104 2e-17 seq3 95.1 1e-14 >seq1 Length=42234885 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089 ||||| | ||||| || | || || || || ||||||||||| ||| | | | | | Sbjct 37712890 AACCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTC 37712949 Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149 | || || ||||||||||| || |||| || | || |||||||| || | ||||||| Sbjct 37712950 CCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGAGGGATACCCTCT 37713009 Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTT 27209 || || |||||| || | | || | ||||| | | ||| ||||| || ||| Sbjct 37713010 TTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTT 37713069 Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||||| |||| ||||||||||||||| ||||| Sbjct 37713070 ATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 37713107 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || | ||| || | ||||| || | || || || |||||||| ||||| || Sbjct 37703212 TGCCCCCCCTCAAACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAG 37703271 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | | |||| || || |||||||| ||| |||| || | ||| |||||||| | Sbjct 37703272 CAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAG 37703331 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||| ||||| || |||||| |||| | || | || || | || ||| | Sbjct 37703332 GGATACCTTCTTTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCGGAGGATTCCA 37703391 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || |||| ||| || |||| ||||||||| ||||||||||| Sbjct 37703392 CCTCGAGTGTGATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 37703440 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || | || ||| ||||| || | ||||| ||||| || || ||||| || Sbjct 37706948 CCCCCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCGCA 37707007 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | ||||| |||||||| ||||| | || || | ||| || || || || Sbjct 37707008 AGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGG 37707067 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| |||||| ||||| | || | || |||| || || Sbjct 37707068 ATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCACC 37707127 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| ||||| | || || |||| ||| || |||||||||||||| Sbjct 37707128 TCTAAGGTTATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCAT 37707174 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || | || ||| ||||| || || ||||| || || || ||||| || || Sbjct 37702984 TGCCACCTCGAAGCCTCAAAACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAATCCG 37703043 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | | | ||||| |||||||| || || | || || | ||| ||||| || | Sbjct 37703044 CAAGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCGGGGG 37703103 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| ||||| |||||| ||| | | || | || |||| || | Sbjct 37703104 GAATACCCTCCTTATCCTGAATCTTGGCTTTGACATTATCAATGGTATCTGAACTCTCCA 37703163 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || | || |||| ||| || |||| ||| || |||||||||||||| Sbjct 37703164 CCTCCAAGGTAATAGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37703212 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || | ||| || | |||||||| | || || || || ||||||||||| || Sbjct 37707174 TGCCGCCTCTCAAACGAAGCACCAAATGGAGGGTGGACTCCTTCTGAATATTGTAATCAG 37707233 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | | | || ||||| ||||| || ||| |||| || | ||| || || || | Sbjct 37707234 CAAGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAG 37707293 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||||| || ||||||| || | | || | ||||||| || | Sbjct 37707294 GGATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTATCAATGGTGTCTGAACTCTCGA 37707353 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||| || |||| ||| || |||||||||||||| Sbjct 37707354 CCTCAAGGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 37707402 >seq5 Length=30687117 Score = 104 bits (114), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 9179504 GTGGACTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 9179445 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||||| ||||| ||||||| || Sbjct 9179444 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG 9179385 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || || || || | || ||||| || ||| Sbjct 9179384 ACATTATCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTT 9179325 Query 27231 TTCACAAAGATTTGCAT---AGCTGCTA 27255 ||||| || || ||||| |||||||| Sbjct 9179324 TTCACGAATATCTGCATTGCAGCTGCTA 9179297 >seq3 Length=41204908 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/208 (70%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||||||| | | |||| |||| ||||||||||| || Sbjct 291358 GTGGACTCTTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGTTTTCCT 291299 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | |||||||| || ||||| || || | ||||| || || ||||||| || Sbjct 291298 GCGAAGATGAGACGTTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 291239 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || || || || | || ||||| || ||| Sbjct 291238 ACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTAAGGGTT 291179 Query 27231 TTCACAAAGATTTGCAT---AGCTGCTA 27255 ||||| || || ||||| |||||||| Sbjct 291178 TTCACGAATATCTGCATTGCAGCTGCTA 291151 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||||||| | | |||| |||| || ||||| || || Sbjct 288770 GTGGACTCTTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCAAGCTGCTTTCCT 288711 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| || || | ||||| || || ||||||| || Sbjct 288710 GCGAAGATGAGACGCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 288651 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || || || || | || ||||| || ||| Sbjct 288650 ACATTATCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATTGTCTTCCCCGTAAGGGTT 288591 Query 27231 TTCACAAAGATTTGCATAGCTGCT 27254 ||||| || || ||||| |||||| Sbjct 288590 TTCACGAATATCTGCATCGCTGCT 288567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424740839061000