Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 125 9e-24 seq3 120 4e-22 seq182 116 5e-21 seq21 102 1e-16 seq25 91.5 2e-13 >seq1 Length=42234885 Score = 125 bits (138), Expect = 9e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 111999 ||| ||||| ||||| || || ||||| || ||||| | ||| ||| ||||| | ||| Sbjct 1929760 CTGTGGTCTAGGTGTTCCCGCGTTGAAAAGAGTTGGAGATGCATGAGTGAACCACCGTTG 1929701 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || ||| || | | ||| ||||||||||||| || || || | || Sbjct 1929700 AGACATCAGGTGGTAAGTTTTGACAGCAGCATCAATGTCTTCCTTATGAATTCCAACAGC 1929641 Query 112060 GACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 112118 ||||| ||| ||||||| ||||| |||||| | |||| | || || || | || | Sbjct 1929640 GACCCTCATCAACATGTGTTGTGGTCTTTCCACAACCTTGCC-TTGAACCTTTAAGAGGT 1929582 Query 112119 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 112166 || | ||||||||||||||| |||||| ||| || | ||| |||||| Sbjct 1929581 AGGACCTCTCAAGGGTTTTGAAACCAAAATAATCATAGTCAAAGTCCC 1929534 >seq3 Length=41204908 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730 ||||||||||| || ||||| || ||||| || ||||| || ||||||||||| ||| Sbjct 26200355 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCATGAGGCCC 26200414 Query 122731 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 122790 || ||||| | ||| | || | ||| || |||||||||||||||||||| || || Sbjct 26200415 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTCGACGCAG 26200474 Query 122791 GCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 ||||| || | ||||| ||||||||||| Sbjct 26200475 GCAAAGGCGACGAGGCGCTCGGCGAAGGA 26200503 Score = 116 bits (128), Expect = 5e-21 Identities = 172/243 (71%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| || || |||||||| || || ||||| || |||||| ||||| ||||| | || Sbjct 34261326 GTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAAGCC 34261267 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | |||| | || | |||||| |||||||||||||| ||||| || || Sbjct 34261266 ACGCTTCTTGAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCAACGCA 34261207 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || || | ||||| |||||||||||| | | ||||| | ||| || || Sbjct 34261206 GGCGAAGGCGACGAGGCGCTCGGCGAAGGAGTCGG---TGGCATCGATCCAGCGCAAGGC 34261150 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||||| |||||||| | | ||| || | || | || ||| || | || ||||| Sbjct 34261149 CCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAACAGGTGATTCTT 34261090 Query 122910 TTC 122912 ||| Sbjct 34261089 TTC 34261087 >seq182 Length=1065506 Score = 116 bits (128), Expect = 5e-21 Identities = 304/460 (66%), Gaps = 8/460 (2%) Strand=Plus/Plus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 |||||| || || | | ||||| || ||||| || | || || || | | ||||| Sbjct 180404 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAA 180463 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 |||||||| || || | | ||| || | || |||||||| |||||||| || Sbjct 180464 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCTCC--- 180520 Query 11602 ACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACA 11658 |||| |||| || | |||| | || || |||||||| ||||||| || ||||| || Sbjct 180521 ACCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 180580 Query 11659 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAAC 11718 ||| ||| || ||| | | || | |||||| || | ||||| |||||||| Sbjct 180581 TGGAGCATTCTCTTTGGCCTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCAAC 180640 Query 11719 AAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCG 11777 ||||||||||||||| | | | ||| | || | ||||||||| || |||||| | Sbjct 180641 AAACATCTCCACAAACTCAGAACCTGAG-ATTGAAAAAAATGGGACACCTGCTTCACCTG 180699 Query 11778 CGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTC 11837 | || || || | || ||||| || || || || ||| | ||||| | ||| Sbjct 180700 CAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACCTT 180759 Query 11838 GGGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCT 11897 || || || ||| || |||||||||| | || ||||| ||||| | || Sbjct 180760 TTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCGGGCTTTTTAAGAAATTCCACCACCT 180819 Query 11898 CTTCAAGTTCATCTTTGGCCGCGTCAATCCCCTCAACATC 11937 | || || | |||||| |||| | || ||||||| Sbjct 180820 CCATAAAATCCTGTTTGGCTTCGTCCACTCCAGCAACATC 180859 >seq21 Length=722760 Score = 102 bits (112), Expect = 1e-16 Identities = 301/460 (65%), Gaps = 8/460 (2%) Strand=Plus/Minus Query 11483 TCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAG 11542 ||||| || || | | ||||| || ||||| || | |||||||| | | ||||| Sbjct 271403 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 271344 Query 11543 CCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATA 11602 |||||||| || || | | ||| || | || || ||||| ||||||||| || | Sbjct 271343 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTTCCTCC---A 271287 Query 11603 CCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACAT 11659 ||| |||| | | ||| | || || |||||||| ||||||| |||||||| || Sbjct 271286 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 271227 Query 11660 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACA 11719 || ||||| ||| | | || | ||| ||||| | ||||| ||||||||| Sbjct 271226 GGGGCGTTTTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAACA 271167 Query 11720 AACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGC 11778 |||||||| ||||| | | | || | || | ||||| ||| | |||||| || Sbjct 271166 AACATCTCAACAAACTCAGAACCGGA-TATTGAAAAAAATGGAACACCAGCTTCACCAGC 271108 Query 11779 GATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCG 11838 || || ||| | |||||||| || || ||||| ||| | ||||| | ||| Sbjct 271107 AATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCTTT 271048 Query 11839 GGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTC 11898 || || || ||| || | ||||| || | ||| ||||| ||||| | ||| Sbjct 271047 AGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTC 270988 Query 11899 TTCAAGTTCATCTTTGGCCGCGTCAATCCCCTCAACATCA 11938 || || | ||||| | || | ||| |||||||| Sbjct 270987 CATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATCA 270948 >seq25 Length=312266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000 || || || || || ||||||||||| || || || | |||||| ||||| | ||| Sbjct 241939 TGAGGCCTAGGAGTTCCAGCATTGAAAAGAGTAGGAGATGCGTGGGTGAACCATCGTTGA 241880 Query 112001 GACATCTTGTCGTATG-TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| ||| ||| | ||| || |||| || ||||| ||| ||| || || | || Sbjct 241879 GACATCATGTGGTAAGTTCTGACAG-CAGATTCTATGTCATCCTTGTGAATCCCAACCGC 241821 Query 112060 GACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 112118 ||| | ||| ||||||| || || |||||| | | || | || || || | || | Sbjct 241820 GACTCTCATCAACATGTGTTGCGGCCTTTCCA-CAACCTTCCCTTGAACCTTTAAGAGGT 241762 Query 112119 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 112166 | | ||||||||||||||| ||||| ||| || | || |||||| Sbjct 241761 AAGACCTCTCAAGGGTTTTGAACCCAAAATAATCATAGTCGAAGTCCC 241714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627738591300000