Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 seq182 114 2e-20 seq21 95.1 1e-14 seq9 87.8 2e-12 >seq3 Length=41204908 Score = 158 bits (174), Expect = 1e-33 Identities = 387/571 (68%), Gaps = 23/571 (4%) Strand=Plus/Minus Query 129727 ATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCA-AGCTGATATTCTCCA 129785 |||||||||||| ||||| || |||||||| || ||||| | | || | ||| ||||| Sbjct 34261626 ATAGTCCCCAACGCGCTTTTCAAAGAAGTTAGTTTTCCCCTGGAGAGAT-ATAAGCTCCA 34261568 Query 129786 TAAAATCAAATGGGTTCTTTGAGTTCCAAATTGCTG---GCACTCCAATCTGTTTGAGGA 129842 | ||||||| || |||| || || | || ||| ||||| | || | Sbjct 34261567 TCCAATCAAAGGGATTCT--GAACACCGTACACCTTCCCGCA-TCCAAGCGCACCCAGTA 34261511 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 | ||||||| ||| ||||||| |||| | |||| || |||||| || | | Sbjct 34261510 GCCGATCCGCGACAAACTCAATATACTGACTCATCAATTCCCCGTTCATCCCCACCAACG 34261451 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 ||| || |||||||| | | ||| || |||| ||||| || ||||| ||||| || Sbjct 34261450 CACAAGGAAGCGCGTCGCACACAAACTCCCTCTCTATGTCAACCGCTTCGCGCACAATCT 34261391 Query 129963 CGTGAATG-GT--CTCCGTGCCAGGTCTAT--TGCGCAAAGTCTTGAAGAGTTCCACGGC 130017 | | | | || ||| ||| || | | || | | || | ||||| |||| | Sbjct 34261390 CCTTCACGCGTTCCTCGGTG--AGCTTCTTCCTGAGGAGAGAGTACAAGAGG--CACG-C 34261336 Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 || || ||| || || || || || ||||||||||| || |||||| ||||| || Sbjct 34261335 GAAGTCGCAGTGAAGCCCTTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGG 34261276 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 ||| | || |||||||| | ||| || |||| || || ||| ||||||||||| || Sbjct 34261275 CATCAAGCCACGCTTCTTGAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCC 34261216 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCA 130197 ||| || || ||||| || | ||| ||||| || |||||| || | | ||| | ||| Sbjct 34261215 CTCAACGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGGAGTCGG---TGGCATCGATCCA 34261159 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 || ||||| || ||||| || ||| ||| |||| ||| | || || || || Sbjct 34261158 GCGCAAGGCCCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCGACGGCGCGGAACAG 34261099 Query 130258 TTCCTTCTTTTCTGATGGA-TCTTTGATGTA 130287 | |||||||| | |||| ||||||||||| Sbjct 34261098 GTGATTCTTTTC-GGTGGAGTCTTTGATGTA 34261069 Score = 150 bits (166), Expect = 2e-31 Identities = 311/455 (68%), Gaps = 12/455 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATT--CTCCA 129785 || ||||| || ||||||||||||||||| |||||||| | || || || || ||||| Sbjct 26200055 TACTCCCCCACGCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCA-GC-GAAATCAGCTCCA 26200112 Query 129786 TAAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGA 129844 | |||| |||||||||| | || | | | | |||| |||| ||| | Sbjct 26200113 TCCAATCGAATGGGTTCTGTACATTGTACACCTTCCCGCAC-CCAAGGGCACCGAGCAAC 26200171 Query 129845 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTA 129904 | ||| | || |||||||||||| | |||| | |||||| || | | | Sbjct 26200172 CTATCAGCAACAAACTCAATGTACTGACTCATCAAGGCCCCGTTCATCCCCACCAACGCA 26200231 Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 || || |||||||| ||| |||| || |||| ||||||||||| || ||||| || | Sbjct 26200232 CAAGGAAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACAGCATCGCGCACAATCTCC 26200291 Query 129965 TGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAAAC 130021 | | |||| | | | | |||| | | | |||| || | || || Sbjct 26200292 CTCACGCGCTCCTCGGGGAGCTTGGTCCGCATAATAGAGTAGAG---CAGGCAAGCGAAG 26200348 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || |||||||||||||| |||||||||||||| || ||||| || ||||||||| Sbjct 26200349 TCGCAATGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCTGGCATG 26200408 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 || ||||| ||||| | |||||| || | ||||| || ||||||||||| ||||| Sbjct 26200409 AGGCCCCGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATACCCTCG 26200468 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || || || || || | ||| ||||| || ||||| Sbjct 26200469 ACGCAGGCAAAGGCGACGAGGCGCTCGGCGAAGGA 26200503 >seq182 Length=1065506 Score = 114 bits (126), Expect = 2e-20 Identities = 181/256 (71%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 14096 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAG 14155 ||||| || ||| | ||| || || || ||||||| ||| ||||| | ||||| Sbjct 180405 TCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAAT 180464 Query 14156 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATA 14215 |||||||| || ||||| ||||| |||| ||| ||||| | |||||||||| | | Sbjct 180465 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCTCC---A 180521 Query 14216 CCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAT 14272 ||| || | || | |||| | || || || ||||||||||| | ||||| || ||| Sbjct 180522 CCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCAT 180581 Query 14273 GGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACCCA 14330 || ||| || ||| |||| || | ||| || |||| ||||| ||||| | Sbjct 180582 GGAGCATTCTCTTTGGC--CTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCAA 180639 Query 14331 CAAACATCTCCACAAA 14346 |||||||||||||||| Sbjct 180640 CAAACATCTCCACAAA 180655 >seq21 Length=722760 Score = 95.1 bits (104), Expect = 1e-14 Identities = 246/369 (67%), Gaps = 12/369 (3%) Strand=Plus/Minus Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124 |||||| || ||||| | | | ||| |||||| || || | ||| || || || Sbjct 271434 ATCAAACCGTCCTGGTCTCAATAAGGCAGAGTCAAGAATGTCTGCCCTGTTAGTTGCTGC 271375 Query 14125 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 14184 ||||||| |||||| || | ||||| |||||||| || ||||| ||||| |||| Sbjct 271374 AATGACAATGATGCCAGTATTACCCTCAAAACCATCCATTTCTGTCAAAAGTTGGTTGAG 271315 Query 14185 GGTTTGTTCGCGTTCATCATTCGCAGGCATACCA---CCCGCACTGCGTTGCTTACCGAC 14241 ||| || || | ||||||||| | |||| || | | | ||| | || || Sbjct 271314 GGTCTGCTCTCTTTCATCATTTCCTCC---ACCAATTCCAGTTCCTCTTTGTCTTCCAAC 271258 Query 14242 GGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA--AAG 14299 || ||||||||||| | || || || || || ||||| ||| |||| || Sbjct 271257 AGCATCAATTTCATCAACAAAGACAATGCAAGGGGCGTTTTCTTTGGC--CTTCTTGAAC 271200 Query 14300 ATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAA 14359 | ||| || |||| ||||| ||||| ||||||||||| ||||| | | ||| | Sbjct 271199 AAATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCGG-A 271141 Query 14360 CATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 14418 |||| | || || || || |||||| || || || ||| | ||||||||||| Sbjct 271140 TATTGAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACAGGGTCTTCCC 271081 Query 14419 CGTCCCTGG 14427 || ||||| Sbjct 271080 AGTTCCTGG 271072 >seq9 Length=31747250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 215/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211 ||| ||||||||||| |||| || || || ||||| ||||| | ||||| || || Sbjct 3997753 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCA-- 3997696 Query 14212 CATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269 | | | | ||||| | | ||| | || ||||||||||| ||||| |||||||| || Sbjct 3997695 CCTCCAAGCCCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 3997636 Query 14270 CATGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328 || || || ||| | | | ||||| | ||| | ||| ||| ||||| || || Sbjct 3997635 CACGGCGCCTTATTCTTCGCCTTC-TCAAACAAATCCCTCACCCTCGACGCACCAACCCC 3997577 Query 14329 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACC 14388 |||||||| |||||| || | | || | || || || || || | ||| || Sbjct 3997576 CACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTCCCC 3997517 Query 14389 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACC 14448 ||| | || | || || || |||||||| || || ||| ||| | |||| | |||| Sbjct 3997516 CGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGGTGGCCCCACCAGAA-GACACC 3997458 Query 14449 ACGT-GGGATCCTGGCACC 14466 | | || ||| | ||||| Sbjct 3997457 CCTTCGGAATCTTCGCACC 3997439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618146274805000