Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq182 152 6e-32 seq3 134 2e-26 seq1 120 4e-22 seq21 116 4e-21 seq235 105 8e-18 seq4 105 8e-18 seq25 104 3e-17 seq8 98.7 1e-15 seq9 93.3 5e-14 >seq182 Length=1065506 Score = 152 bits (168), Expect = 6e-32 Identities = 315/463 (68%), Gaps = 12/463 (3%) Strand=Plus/Plus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9615 |||||| || ||| | | || || || || ||||||| ||||| || | | ||||| Sbjct 180404 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCCGTATTACCCTCAAA 180463 Query 9616 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9675 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || Sbjct 180464 TCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CC 180520 Query 9676 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732 |||| |||| || | |||| |||| || |||||||| ||||||| || || ||||| Sbjct 180521 ACCAATTCCAGTACCCCTTTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCA 180580 Query 9733 TGGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCA 9790 ||| ||| || || |||| || | ||| || || || || || |||||| Sbjct 180581 TGGAGCATTCTCTTTGGC--CTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCA 180638 Query 9791 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 9849 ||||||||||||||||| | | | | | |||| | || |||||| | |||||| Sbjct 180639 ACAAACATCTCCACAAACTCAGAACCTG-AGATTGAAAAAAATGGGACACCTGCTTCACC 180697 Query 9850 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 9909 ||||| || || | ||| ||||| || || || || ||| | || || |||| Sbjct 180698 TGCAATAGCCTTTGCTAAAAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACC 180757 Query 9910 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 9969 | ||| || || ||| || | ||||||| || | |||||||| ||||| | Sbjct 180758 TTTTGGTATGCGAGCCCCAACAGCAGTGAATCTCTCGGGCTTTTTAAGAAATTCCACCAC 180817 Query 9970 TTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCG 10012 || || || | |||||| |||| | || |||||||| Sbjct 180818 CTCCATAAAATCCTGTTTGGCTTCGTCCACTCCAGCAACATCG 180860 >seq3 Length=41204908 Score = 134 bits (148), Expect = 2e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||| || ||||| ||| |||| ||||| || || ||||||||||||||||| || | Sbjct 26200503 TCCTTCGCCGAGCGCCTCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAGC 26200444 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || ||| | || | ||||||||||| || || ||||||||||| ||| ||||||||| Sbjct 26200443 TTTTGCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAAC 26200384 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCA 94943 || || ||||| || |||||||| ||||| Sbjct 26200383 GAACTCATCTCCCGCGACGAGGGTCTCCA 26200355 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||| || ||||| ||| |||| || || || |||||||| ||||||||||| || | Sbjct 34261177 TCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTTGAGGGAATCTTCTTCTCCGGCAGC 34261236 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 |||||| | || | ||||||||||||||| || | ||||| |||||| |||||||||| Sbjct 34261237 TTCTGCTCGATATTTTGGCTCAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAAC 34261296 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || || ||||| || || || || || ||| Sbjct 34261297 GAACTCATCTCGCGAGATGAAGGGCTTCAC 34261326 >seq1 Length=42234885 Score = 120 bits (132), Expect = 4e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACG 104196 || |||| |||| || |||||||||| ||||||||||||||| | ||| || | || | Sbjct 1929533 AGGGACTTTGACTATGATTATTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTCTTAAAG 1929592 Query 104197 GCTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTAT 104256 | || | | ||| |||||| ||||| ||||||| ||| | || || | || || Sbjct 1929593 GTTCAAGGCAAGGTTG-TGGAAAGACCACAACACATGTTGATGAGGGTCGCTGTTGGAAT 1929651 Query 104257 TCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTT 104316 |||| ||||||||||||| ||| | | || ||| || |||||| ||| | ||| Sbjct 1929652 TCATAAGGAAGACATTGATGCTGCTGTCAAAACTTACCACCTGATGTCTCAACGGTGGTT 1929711 Query 104317 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCA 104364 || ||| ||| | ||||| || ||||| || || ||||| ||||| || Sbjct 1929712 CACTCATGCATCTCCAACTCTTTTCAACGCGGGAACACCTAGACCACA 1929759 >seq21 Length=722760 Score = 116 bits (128), Expect = 4e-21 Identities = 279/416 (67%), Gaps = 12/416 (3%) Strand=Plus/Minus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| || || | | || || || || ||||||| || || || | | |||||| Sbjct 271403 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 271344 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 |||||||| ||||||||||||||||| | || || || | ||||||||| || | Sbjct 271343 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTTCCT---CCA 271287 Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 ||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||||| Sbjct 271286 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 271227 Query 9734 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 || ||||| || |||| || | ||| || || || || || ||||||| Sbjct 271226 GGGGCGTTTTCTTTGGC--CTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 271169 Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850 |||||||||| ||||| | | ||| | |||| | || || ||| || |||||| Sbjct 271168 CAAACATCTCAACAAACTCAGAACCGG-ATATTGAAAAAAATGGAACACCAGCTTCACCA 271110 Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910 ||||| || ||| | || ||||| || || ||||| ||| | || || | ||| Sbjct 271109 GCAATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 271050 Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 || || || ||| || | | |||||||| | ||| ||||| ||||| Sbjct 271049 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCAC 270994 >seq235 Length=417634 Score = 105 bits (116), Expect = 8e-18 Identities = 179/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Minus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| || || | | || || || || ||||||| ||||| || | | | |||| Sbjct 284057 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTTAAAA 283998 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 |||||||| ||||||||||||||||| | || || || | |||||||||| || | Sbjct 283997 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 283941 Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 ||| |||| | | ||| |||| || |||||||| ||||||| ||||| ||||| Sbjct 283940 CCAATTCCAGTTCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 283881 Query 9734 GGTTGATTTTCGCGAGCGACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 || | ||| | | ||||| || | ||| || || || || || ||| ||| Sbjct 283880 GG--GGCGTTCTCTTTGGCCTTCATGAACAAATCACGAACTCGAGAAGCACCAACATCAA 283823 Query 9792 CAAACATCTCCACAAA 9807 |||||||||| ||||| Sbjct 283822 CAAACATCTCAACAAA 283807 >seq4 Length=34671004 Score = 105 bits (116), Expect = 8e-18 Identities = 179/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| || || | | || || || || ||||||| ||||| || | | |||||| Sbjct 10195157 TCAAGAATGTCTGCCCTGTTAGTTGCTGCAATGACAATGATACCAGTATTACCCTCAAAA 10195216 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 |||||||| ||||||||||||||||| | ||||| || | |||||||||| || | Sbjct 10195217 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTTTGCTCTCTTTCATCATTCCCT---CCA 10195273 Query 9677 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 ||| |||| | | ||| |||| || ||||||| ||||||| ||||| ||||| Sbjct 10195274 CCAATTCCAGTTCCTCTTTGTCTTCCAACATCATCAATTTCATCAACAAAGACAATGCAA 10195333 Query 9734 GGTTGATTTTCGCGAGCGACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 || | ||| | | ||||| || | ||| || || || || || ||| || Sbjct 10195334 GG--GGCGTTCTCTTTGGCCTTCATGAACAAATCACGAACTCGAGAAGCACCAACATTAA 10195391 Query 9792 CAAACATCTCCACAAA 9807 |||||||||| ||||| Sbjct 10195392 CAAACATCTCAACAAA 10195407 >seq25 Length=312266 Score = 104 bits (114), Expect = 3e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACG 104196 || |||| ||||| || ||||||||| ||||||||||||||| | || || | || | Sbjct 241713 AGGGACTTCGACTATGATTATTTTGGGTTCAAAACCCTTGAGAGGTCTTACCTCTTAAAG 241772 Query 104197 GCTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTAT 104256 | || | || ||| |||||| || || ||||||| ||| | || || | || || Sbjct 241773 GTTCAAGGGAAGGTTG-TGGAAAGGCCGCAACACATGTTGATGAGAGTCGCGGTTGGGAT 241831 Query 104257 TCATGGGGAAGACATTGATTCTGTCTTGGAGA-CATACGACAAGATGTCCCAAGGTATGT 104315 ||| ||| ||||| || |||| || ||| | ||| ||| |||||| ||| | || Sbjct 241832 TCACAAGGATGACATAGAATCTG-CTGTCAGAACTTACCACATGATGTCTCAACGATGGT 241890 Query 104316 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAA 104365 ||| |||||| | || || || ||||||||||| || || || || ||| Sbjct 241891 TCACCCACGCATCTCCTACTCTTTTCAATGCTGGAACTCCTAGGCCTCAA 241940 >seq8 Length=30791815 Score = 98.7 bits (108), Expect = 1e-15 Identities = 215/319 (67%), Gaps = 10/319 (3%) Strand=Plus/Plus Query 9575 TTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAA 9634 || || || || ||||||| |||| || | | | |||||||||||| | ||||||| Sbjct 7412085 TTAGTTGCTGCAATGACAATGATACTAGTATTACCCTTAAAACCATCCATTTATGTCAAA 7412144 Query 9635 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGT 9691 |||||||| | || || | | |||||||||| || |||| |||| | | | Sbjct 7412145 AGTTGGTTGAGGGTCTGCTTTCTTTCATCATTCCCT---CCACCAATTCCAGTTCCTCTT 7412201 Query 9692 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 9751 || |||| || |||||||| ||||||| ||||| ||||| || | ||| | | Sbjct 7412202 TGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAAGG--GGCGTTCTCTTTGG 7412259 Query 9752 ACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809 ||||| || | ||| || || || || || ||||||||||||||||| ||||| | Sbjct 7412260 CCTTCATGAACAAATCACGAACTCGAGAAGCACCAACACCAACAAACATCTCAACAAACT 7412319 Query 9810 TTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9869 | | || | | || || ||| || |||||| ||||| || ||| | | Sbjct 7412320 CAGAACCAGATATTAAAAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCCAACA 7412379 Query 9870 GAGTCTTACCCGTACCTGG 9888 | ||||| || || ||||| Sbjct 7412380 GGGTCTTCCCAGTTCCTGG 7412398 >seq9 Length=31747250 Score = 93.3 bits (102), Expect = 5e-14 Identities = 247/372 (66%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9670 ||| ||||||||||| |||| ||| |||||||| || ||||||| ||||| || | | Sbjct 3997753 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 3997694 Query 9671 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 || | || || | | ||| | |||||||| ||||||||||||||||| || ||| Sbjct 3997693 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 3997636 Query 9731 CATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 9786 || || || | ||||| | ||||| | ||||| || | | || || || Sbjct 3997635 CACGGCGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 3997580 Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846 || ||||||| |||||| || | | || | || || || || || | ||| Sbjct 3997579 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACTCCCGCTTC 3997520 Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906 ||||| | || | || ||||| ||||| || || || || ||| | | || | | Sbjct 3997519 CCCCGCCACAGCCCTAGCTAGAAGCGTCTTCCCGGTTCCCGGTGGCCCCACCA-GAAGAC 3997461 Query 9907 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 9965 ||| | | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 3997460 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 3997401 Query 9966 CAATTTCTTCCA 9977 ||| |||| || Sbjct 3997400 CAACCTCTTGCA 3997389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582988307845000