Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 >seq3 Length=41204908 Score = 158 bits (174), Expect = 1e-33 Identities = 569/872 (65%), Gaps = 30/872 (3%) Strand=Plus/Minus Query 59562 TTTCCTATACGGTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGG 59621 || ||||| | ||||| | | |||| |||| |||||||| | || |||||| Sbjct 26200911 TTCCCTATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTTCTGG 26200852 Query 59622 TCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTCAATTACGAC 59681 | | |||||| | |||||| | ||| | | | ||| ||| || | ||| | Sbjct 26200851 ACGGCGGAGGAGGTGGACCTCTCGCAGGACATCAGTCACTGGAACACTCTTACCGACGGC 26200792 Query 59682 GAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATG 59741 |||| |||||| ||| ||||| ||||||||||| || || || || || | Sbjct 26200791 GAGCGCCATTTCGTCACCCATGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTACTA 26200732 Query 59742 GAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTAC 59801 ||||| | | | ||| ||||| |||||| | ||||||| || | || ||| Sbjct 26200731 GAAAACCTTGCCGGCCGTTTTATGAAGGAGGTCCAGGTCTCCGAGGCTCGCGCCTTTTAC 26200672 Query 59802 GCGTATCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAA 59860 | | ||| ||| | | |||| || |||||||||| |||| ||| | |||| | Sbjct 26200671 GGCTTCCAGATCGCT-ATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAAC 26200613 Query 59861 GTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCG 59919 | | || || | | |||||| | |||| || | ||||| || || | ||| | Sbjct 26200612 CTACATAAAAGACTCCGTAGAGAAAACCCGTCTCTTTCACGCCATTGACACCATTCCCTG 26200553 Query 59920 CAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTG-GAGCATCATTTGC 59977 | || | | || || | |||||| | | ||||| || |||| ||| || || || Sbjct 26200552 C-GTCACCAAGAAGGCCAACTGGGCCCTCCGCTGGATCGACTCCTCCGAG--TCCTTCGC 26200496 Query 59978 ACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGC 60037 | || ||| | || ||||| ||||| || || ||||||||||| || || || | Sbjct 26200495 CGAGCGCCTCGTCGCCTTTGCCTGCGTCGAGGGTATCTTCTTCTCCGGAAGCTTTTGCTC 26200436 Query 60038 TATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 || ||||||||||| || || ||||||||||| || || | |||||||||||| || || Sbjct 26200435 CATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACTTTCTCCAACGAACTCAT 26200376 Query 60098 TTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCTATT-- 60154 ||||| |||||||| |||||| || || || || | |||||| | ||||| Sbjct 26200375 CTCCCGCGACGAGGGTCTCCATTGCGACTTCGC-TTGCCTGCTCTACT-----CTATTAT 26200322 Query 60155 --GGAAAAATGCCCTTCCAAGGA---TATTCACAAGATTGTTCAGTGGGCTTGTGAAGTG 60209 ||| || || | || |||| | ||||||| | ||| || | Sbjct 26200321 GCGGACCAA-GCTC-CCCGAGGAGCGCGTGAGGGAGATTGTGCGCGATGCTGTGGACATC 26200264 Query 60210 GAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAA 60269 ||||| |||||| || || |||||||| || | | || ||| ||| | Sbjct 26200263 GAGAGGGAGTTCGTCTGCGACGCGCTTCCTTGTGCGTTGGTGGGGATGAACGGGGCCTTG 26200204 Query 60270 ATGACGCAGTACATTCAGTTTGTCGCGGACCG---CCTCATGGCCCAGTTTGGAGAAGGA 60326 |||| ||||||||| ||||||| || || | ||| |||| || || | ||| Sbjct 26200203 ATGAGTCAGTACATTGAGTTTGTTGCTGATAGGTTGCTCGGTGCCC--TTGGGTGCGGGA 26200146 Query 60327 CCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAG 60386 | ||| || | ||||| ||||| ||||||||| || ||| || | |||||| Sbjct 26200145 -AGGTGTACAATGTACAGAACCCATTCGATTGGATGGAGCTGATTTCGCTGCAGGGGAAG 26200087 Query 60387 ACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||||||||| |||||||| || ||||| || Sbjct 26200086 ACCAACTTCTTCGAGAAGCGCGTGGGGGAGTA 26200055 Score = 143 bits (158), Expect = 3e-29 Identities = 543/837 (65%), Gaps = 20/837 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| |||||||| | ||| |||||| ||| ||| ||| |||||||| || ||||| Sbjct 34260800 TGTACAAGAAAGCCGAAGCTTCTTTCTGGACCGCCGAAGAGGTTGACCTCTCCCAAGACC 34260859 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | | |||||| |||| ||| ||||| || ||||||| |||| |||| Sbjct 34260860 TCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCACATCCTCGCCT 34260919 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCC--AAGGA 59770 |||| || || || || || || | ||||| | | || | ||| ||||| Sbjct 34260920 TCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGC--TGCCCGCTTCATGAAGGA 34260977 Query 59771 TGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCC 59829 |||| |||||||| || | ||||||| | ||| ||| || |||| |||| Sbjct 34260978 AATCCAAGCCGCCGAGGCTCGTGCTTTCTACGGCTTCCAGATCGC-CATCGAGAACATCC 34261036 Query 59830 ACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGA-TCCG--GAAGAGAAGG 59886 ||||||||| |||| ||| | | || | | |||| || ||| ||| |||| Sbjct 34261037 ACTCCGAGATGTACAGTCTCCTCTTGGAAACCTACATCAAAGACTCCACCGAAAAGAA-- 34261094 Query 59887 CTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 | |||||||| ||| | || || |||| || | || || |||||||| Sbjct 34261095 -TCACCTGTTCCGCGCCGTCGATACCATCCCCTGTGTCGCCAAGAAGGCCCAATGGGCCT 34261153 Query 59947 TGCAGTGGATGAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGG 60006 ||| ||||| | | | || || || | || ||| | || || || ||||| | Sbjct 34261154 TGCGCTGGATCGATGCCACCGACTCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTTG 34261213 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | |||||||||||||| ||| ||||| | || || |||||||| ||||||||| | | Sbjct 34261214 AGGGAATCTTCTTCTCCGGCAGCTTCTGCTCGATATTTTGGCTCAAGAAGCGTGGCTTGA 34261273 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| || || | ||||||||||| || || || || || || || || || || | Sbjct 34261274 TGCCCGGTCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAAGGGCTTCACTGCGACT 34261333 Query 60127 TTGCAGTGACGC-TCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGA---TATTCAC 60182 | || ||| | | | || || | ||| |||| || || | || |||| | | Sbjct 34261334 TCGC-GTGCCTCTTGTACTCTCTCCT-CAGGAAGAA-GCTC-ACCGAGGAACGCGTGAAG 34261389 Query 60183 AAGATTGTTCAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242 ||||||| | || ||| | ||||| ||||| | || |||||||| || Sbjct 34261390 GAGATTGTGCGCGAAGCGGTTGACATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCTTGT 34261449 Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302 | | || ||| ||| | | |||| ||||| ||| ||||||||||||| || Sbjct 34261450 GCGTTGGTGGGGATGAACGGGGAATTGATGAGTCAGTATATTGAGTTTGTCGCGGATCGG 34261509 Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATG 60362 || ||| | ||||| || | ||||| || | || || || || |||||| Sbjct 34261510 CTACTGGGTGCGCTTGGATGCGGGAAGGTGTACGGTGTTCAGAATCCCTTTGATTGGATG 34261569 Query 60363 GAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTAT 60419 ||| || || | | ||||| || ||||||||||| ||||| || ||||| ||| Sbjct 34261570 GAGCTTATATCTCTCCAGGGGAAAACTAACTTCTTTGAAAAGCGCGTTGGGGACTAT 34261626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548268536070000