Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq1272 165 7e-36 >seq1272 Length=102696 Score = 165 bits (182), Expect = 7e-36 Identities = 462/701 (66%), Gaps = 26/701 (4%) Strand=Plus/Minus Query 86458 CTAAAATCCTGTTCTTAGACATCGAGACCGCGCCGCTGAAGGGACATCTCTGGAGTCT-- 86515 |||| ||||||||| | |||||||||||| ||| | | | ||| | ||| | || Sbjct 59058 CTAAGATCCTGTTCATTGACATCGAGACCAGCCCGATCATTGCTCATGTATGGCGCCTGT 58999 Query 86516 TTGGC-AGAACGGGATTGGATTGAACCAGCTGGTTTCTGACTGGTACATGCT-ATCTTTC 86573 ||| | |||||| |||| |||||||| | | ||||||||| || || | ||| Sbjct 58998 TTGACCAGAACG---TTGGTCTGAACCAGATCGAAGCTGACTGGTCGATCCTGAGCTTCT 58942 Query 86574 GTAGCCAAATGGGCTGATCAGGACGAGGTCATTTATCGCGATATCCGTGAT------AAC 86627 || || || ||| | | || ||| |||| || || || | ||||| ||| Sbjct 58941 GT-GCGAAGTGGAAGGGTTCTGAGGAGATCATCTACCGTGACACTCGTGACCGCAAGAAC 58883 Query 86628 TACGATAAGGAAAGTGATGCATCTATCCTTCAAGACCTGTGGGATTTGCTTGATGAAGCG 86687 | | || | || |||| ||| | || | || |||||| | |||| | || || Sbjct 58882 TTCAATGATGACAGTG---CAT---TGCTAGATGAACTGTGGACTCTGCTGAACGAGGCA 58829 Query 86688 GATTTTGTTGTTGGGCATAATGTCCGTAAG---TTCGACATTAAGAAGGTCAATGCTCGT 86744 || ||||||||||| || || | | ||| || || | |||||| || |||||| Sbjct 58828 GACTTTGTTGTTGGCCAGAA---CAGCAAGCGGTTTGATGTGAAGAAGATCTTTGCTCGG 58772 Query 86745 TTCCTGTTGAATGGAATGGATAAGCCGTCAACTTTCCGTATTATCGATACCATGCTTATT 86804 || | | ||||| ||| ||||| || ||||| || ||||| || Sbjct 58771 TTTGTACTCAATGGTATGCCGAAGCCTAGCACCTTCCGCCAGATTGATACACTGGACCAA 58712 Query 86805 GCCAAAGCCCTGTTTGGATTCACCTCCAACAAGCTGGAATACTTGACAGATCGCCTGTGT 86864 || || |||||||| |||||| |||||| || || ||| |||| || |||||| Sbjct 58711 GCTAAGCGTCTGTTTGGCTTCACCAGCAACAAACTTGAGTACATGACTGACAAGCTGTGT 58652 Query 86865 ACGAAATACAAGAAGTCTAAGCATACCAAGTTCCCAGGACATCTCCTGTGGGATGAGTGC 86924 | ||||| ||| || || | |||||||| || ||| ||||||| | ||| Sbjct 58651 GTGGTGTACAAAAAGAAGAAACACAGTAAGTTCCCTGGTCATGAGCTGTGGGCACAATGC 58592 Query 86925 CTGAAAGGCAACCCTGAAGCTTGGGATGAGATGGAAGAGTATAACAAGTTCGACGTTTTA 86984 ||||||| ||||| ||||||||||| || ||| | || |||||| ||| || || | Sbjct 58591 ATGAAAGGAAACCCAGAAGCTTGGGAAGAAATGCAGGAATATAACGAGTATGATGTGCTG 58532 Query 86985 TCGAACCAAGAGTTGTACGAAATCTTCATGCCTTGGGATTCTCGTCTGCCTAACTTCGAT 87044 || | ||||| |||| || || | | |||||||| || || ||||| || Sbjct 58531 TCACTCGAAGAGCTGTATGACATTCTGTCGACTTGGGATGACAAGCTTCCAAACTTTGAC 58472 Query 87045 CTGTATGTTGATGGTGTTCTGGATATGAGTGAGTGGATCGAGGATGGCTTCCATTACACC 87104 | ||||| || || || || ||| ||||||| |||||||||| || || | | Sbjct 58471 GTTTATGTGGACCAAGTACTCGACATGTCTGAGTGGGAAGAGGATGGCTATCACTATAGC 58412 Query 87105 AACCTTGGCAAGTACCAACGTTACCGTCACAAGGTCACCGG 87145 |||||||| |||||| | || || || |||| || || || Sbjct 58411 AACCTTGGAAAGTACAAGCGGTATCGCAACAAAGTGACTGG 58371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457216694235000