Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq37374 491 5e-134 seq6 174 2e-38 >seq37374 Length=151683 Score = 491 bits (544), Expect = 5e-134 Identities = 685/956 (72%), Gaps = 8/956 (1%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | |||||||| | | | ||||| | | ||| Sbjct 4278 TTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTC-TGTA 4220 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| | || ||||| || || || || || ||||| || |||||||| || || || Sbjct 4219 TTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTT 4160 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | ||||||||||| ||||||||||| ||||| || || || | | || | || Sbjct 4159 TCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCG 4100 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || || || | || || || || || ||||||||||| | ||||| |||||| | ||| Sbjct 4099 GCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAATGGTTATAC 4040 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTT---AC 176442 || || || || || |||| |||| | |||||| | | ||| | ||||| || Sbjct 4039 AACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGCTAC 3983 Query 176443 ATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCA 176502 ||||| || | ||||||||||||| | || || |||||||||||||| ||||||| Sbjct 3982 ATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCA 3923 Query 176503 TACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGA 176562 || || || || || | || || | || |||||| | ||||||| | ||||||||| Sbjct 3922 TATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAAGGA 3863 Query 176563 TCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTC 176622 || || |||||||||||||| || ||||| ||||| ||||| |||||| ||||||| Sbjct 3862 AGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTT 3803 Query 176623 CAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTT 176682 || || ||||| || ||||| ||||| ||||| || ||| | || ||||| ||||| || Sbjct 3802 CAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTC 3743 Query 176683 GGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAG 176742 || || || || ||| || ||||| || | || |||||| | | || || Sbjct 3742 GGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAA 3683 Query 176743 ACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATAC 176802 || || ||||| ||||| || | ||||||| ||| || ||||| ||||| || || Sbjct 3682 ACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACTTAT 3623 Query 176803 AACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAAT 176862 || ||||||||||| || ||||| ||||| || | |||||||| ||||| |||||| Sbjct 3622 AATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAAC 3563 Query 176863 AACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACT 176922 || || | | | || |||||||| || || | || || || | || |||||||| Sbjct 3562 AATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACC 3503 Query 176923 GCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTC 176982 || | ||| | |||| ||||| |||||| | || ||||| || |||||||| || || Sbjct 3502 GCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAACCAATCCGTA 3443 Query 176983 TTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTT 177042 | || | ||| || || ||| |||| ||||| ||||||| || |||||| Sbjct 3442 GTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGAGCTAACCTT 3383 Query 177043 GGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGC 177098 ||||||||||| ||||| || ||||||||||| || ||||| || || || ||||| Sbjct 3382 GGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGC 3327 >seq6 Length=19356003 Score = 174 bits (192), Expect = 2e-38 Identities = 249/349 (71%), Gaps = 4/349 (1%) Strand=Plus/Plus Query 176737 AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAG 176796 || || || || ||||| |||| ||| | ||||||||||| || ||||||||||| Sbjct 3410843 AGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAAGAAGAAGAA 3410902 Query 176797 ACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCT 176856 || || || ||||||||||| || | || ||||| || | |||||||| ||||| | Sbjct 3410903 ACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAATATGCAAGT 3410962 Query 176857 TTCAATAACTCAAGAAGTCTTCAC--TTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCT 176914 ||||| || || | |||| || |||||||| || || | || | || | || | Sbjct 3410963 TTCAACAATTCTCG--TTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTT 3411020 Query 176915 GGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACC 176974 ||||||| || | ||| | |||| |||| |||||| | || ||||| || ||||||| Sbjct 3411021 GGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAATTTCAACC 3411080 Query 176975 AGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTG 177034 | || || | || | ||| || || ||| |||| ||||| ||||||| | Sbjct 3411081 AATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGAG 3411140 Query 177035 CAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCC 177083 | ||||||||||||||||| ||| | || ||||||||||| || || || Sbjct 3411141 CTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCC 3411189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603212454960000