Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_028882.1 Length=84583 Score E Sequences producing significant alignments: (Bits) Value seq1272 87.8 1e-12 >seq1272 Length=102696 Score = 87.8 bits (96), Expect = 1e-12 Identities = 187/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 15653 CTTGAAGTAGCGGGCAATCTCTGCCCCGGTCCCCAGGACGTTGACGTATCCCCCTTTAGG 15712 ||||||||| ||| ||||||| || || || |||||| ||| | || ||||| Sbjct 79887 CTTGAAGTACTTGGCGATCTCTGTGCCAGTACCTGCGACGTTTCGGTACGCACCCTTAGG 79828 Query 15713 GCGGCGAAGTTTCTCACTGAGCTTGGCCCCGAACACCCCGTATGCCAGGCCGTGGGTCGT 15772 || || || | | || ||||| ||||| | |||||| |||| |||||| || Sbjct 79827 TCGCTTCAGCTTGTGTTGCAACTGTGCCCCAAACACGCGGTATGCGAGGCTGTGGGTGGT 79768 Query 15773 CTTCTTTACCACCCACTGCGGGAACTTGTTCTTGGCCTCTTCTGCCATGGACTTGTTGAA 15832 | | | ||||| ||||| | ||||| || ||||| | ||||||||| Sbjct 79767 CATGCAGTCAACCCAGCCGGGGAAGCGCTCTTTGGCGTCCATTGCCAGTGCCTTGTTGAA 79708 Query 15833 GGCCAGGTACAGGGA-GGTAACCTGGAGGCGTTGAGAGACCAGGCTCATGGTGGTGGTCT 15891 || |||| ||||||| ||| | | ||| | | | |||| | ||| |||||||| | Sbjct 79707 GGTCAGGAACAGGGATGGTGATGGGTTGGCATCG-GCCACCATGGTCAGTGTGGTGGTTT 79649 Query 15892 TCGCTGCACCGGCCCCTGCATTGATTTTCAGGCGGCG 15928 | | ||||||||| ||| ||||| || |||||||| Sbjct 79648 TGGATGCACCGGCATATGCCTTGATCTTGAGGCGGCG 79612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 270417566552000