Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=42234885 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||||||| | || || ||| ||| ||| | || || ||| | || Sbjct 37703440 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACACTCGAGGTGGAATCCTCC 37703381 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || || || || |||||||||||| | || ||| | Sbjct 37703380 GATACCATTGATAAT--GTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATC 37703323 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | ||||| || || |||||| | || |||| | | | | | | ||||||| Sbjct 37703322 AGCAGAGGCTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACA 37703263 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||| ||||| || |||| | || |||||| | |||||| | || ||| Sbjct 37703262 ACATTCAAAAGGAATCCACTCTCCACTTGGTTCTTCGTTTGAGGGGGGGC 37703213 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| ||||||||||| ||| | ||||||||| || || | || || |||||| | Sbjct 37702757 AATGCAGATTTTTGTGAAGACTTTAACTGGGAAAACCATAACTTTGGAGGTTGAAAGCTC 37702698 Query 27849 CG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 | || || ||||| || || ||| || ||||| ||||| | || ||| Sbjct 37702697 TGACACTATTGACAAT--GTAAAGGCAAAGATTCAGGACAAGGAAGGCATCCCACCGGAC 37702640 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 ||||| | | || ||||| || || || ||||| || | || | | | | ||||| Sbjct 37702639 CAGCAGAGACTTATCTTTGCTGGGAAGCAGTTGGAAGATGGGCGTACCCTTGCAGATTAT 37702580 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||| ||||| |||| |||| ||||| ||| | | ||||| || Sbjct 37702579 AACATCCAGAAAGAATCCACTCTGCACTTGGTGTTGAGGCTTCGTGGTGG 37702530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355700301896625