Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq37374 636 2e-177 seq6 262 4e-65 seq9 181 1e-40 >seq37374 Length=151683 Score = 636 bits (704), Expect = 2e-177 Identities = 738/989 (75%), Gaps = 6/989 (1%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 |||||||| ||| |||| ||||| |||||| | || | || ||||| || || || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 163988 ATGATTCCCTGCCTGCTGGCAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTCC 164046 |||||||| | || | || ||| | ||| || || ||||| || |||| ||| || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACTTC-TGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 164047 TCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 164106 ||| || || || ||||| || || || || || |||| || || | ||||||||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 164107 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 164166 ||||| |||||||| |||| ||| ||||| ||||| ||| |||| || || || || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 164167 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 164226 ||||||||||| | | || |||||| | |||||||| ||||||| |||| |||| Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 164227 GTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTAC 164284 | |||||| | |||| | || |||| ||||||||||||||||||||||| || Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTT 3956 Query 164285 CGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGT 164344 ||||| |||||||||||||||||| || ||||| || |||||||| || || || | | Sbjct 3955 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACT 3896 Query 164345 GCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGC 164404 || || ||| || |||||||| | |||||||| || || |||| |||||||| || Sbjct 3895 GCTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGA 3836 Query 164405 ATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCAC 164464 || ||||| || ||||| | ||| | || || ||||||||||| || || || ||||| Sbjct 3835 ATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCAT 3776 Query 164465 CCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCAC 164524 || || || ||| | || ||||| ||||| || ||||| || || |||||||| ||||| Sbjct 3775 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 3716 Query 164525 GGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTAT 164584 ||||| |||| |||||| || | | || ||||| |||||||| ||| || | Sbjct 3715 GGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAA 3656 Query 164585 GGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTT 164644 ||||||| |||||||| || |||||||| || || || || || ||||| ||||| ||| Sbjct 3655 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTT 3596 Query 164645 GGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTC 164704 || || |||| |||||||| || |||||||| || ||||| | || |||||||| Sbjct 3595 GGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTA 3536 Query 164705 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTC 164764 || || |||||||| || ||||| |||||||| ||| | || | ||||| ||||| ||| Sbjct 3535 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTC 3476 Query 164765 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 164824 ||| | || ||||| || |||||||| ||| | | ||| |||| |||||||| | || Sbjct 3475 AACTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAAT 3416 Query 164825 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAAT 164884 |||||||| || || | ||||| ||| || || |||||||| ||||| || |||||| Sbjct 3415 ACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAAT 3356 Query 164885 GCTCACAACTTCCCTCTCGACCTTGCTGC 164913 ||||| || |||||||| || || ||||| Sbjct 3355 GCTCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 540 bits (598), Expect = 1e-148 Identities = 718/992 (72%), Gaps = 4/992 (0%) Strand=Plus/Minus Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239 || ||||||||||||||||| || ||||| || || | || ||||| || ||| | Sbjct 31134 AGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTTCCTTGCGCCTATTTC 31075 Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299 || | ||||||||| |||| || || || || || || |||||||||||||| | Sbjct 31074 GCCTTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGGTATACTCACGGCTTG 31015 Query 165300 GCGAGTTCCTATCTTGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGA 165358 || ||||| ||| | || || ||||| ||| | || || |||||||| ||||| || | Sbjct 31014 GCAAGTTCTTATTTAGAAGGCTGCAA-CTTCTTAACCGCTGCAGTTTCCACTCCCGCTAA 30956 Query 165359 CGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCG 165418 | | | || ||| | || | || ||||||||||| | || || || || | ||| Sbjct 30955 TAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCG 30896 Query 165419 CTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTAT 165478 ||||| || | || || || ||||||||||| || |||||||| || || | | | || Sbjct 30895 TTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAAT 30836 Query 165479 AGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATG 165537 |||||||||| | || || |||||||| || ||| || || | | || ||||| |||| Sbjct 30835 AGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATG 30777 Query 165538 CTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGG 165597 | || || ||||| ||||| |||||||| || ||| ||| |||||||| ||||| |||| Sbjct 30776 CAATCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTTATTTATCCACTGG 30717 Query 165598 GACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGC 165657 | || || |||||||| || || || || || ||||| || || |||||| | | Sbjct 30716 GTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCC 30657 Query 165658 TCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAG 165717 |||| ||||||| || ||||| ||||| | || || ||||| |||||||| || || | Sbjct 30656 TCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTG 30597 Query 165718 GTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGT 165777 || | || |||| ||| | || | || |||||||||| || ||||| |||||||| | Sbjct 30596 GTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTAT 30537 Query 165778 ATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAA 165837 |||||||||||| ||||| || ||| || ||| | || || | || |||| Sbjct 30536 TTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAA 30477 Query 165838 CTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCA 165897 ||||||| ||||| |||||||| || || ||||| || || ||||| ||||||| || Sbjct 30476 CTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCA 30417 Query 165898 ATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTT 165957 |||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| Sbjct 30416 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTG 30357 Query 165958 CTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGA 166017 || |||| | | ||| | || || || | ||||||||||| || || ||||| || | Sbjct 30356 CTCTTGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACTTCGTTTCTCAAGAAA 30297 Query 166018 TTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATG 166077 | | || || || ||||| || ||||| || ||||| || ||||| || ||| | || | Sbjct 30296 TCCGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACG 30237 Query 166078 AAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTG 166137 |||| | ||||| ||| |||| || ||| || |||||||| ||| || | ||||||| Sbjct 30236 AAGGTATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 30177 Query 166138 AAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 | || || | ||| | || ||||| |||||| Sbjct 30176 AGGAGGTTCTACCACGTGGAAACGCTCTTTAA 30145 >seq6 Length=19356003 Score = 262 bits (290), Expect = 4e-65 Identities = 316/430 (73%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 164483 GTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACTTCT 164542 ||||| ||||| || ||||| || || |||||| | ||| | ||||| |||| |||||| Sbjct 3410774 GTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTCT 3410833 Query 164543 TCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAG 164602 || | | || ||||| |||||||| | || | |||||||| |||||||| Sbjct 3410834 AGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCAA 3410893 Query 164603 GAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGGTCGTCTGATTTTCCAA 164662 ||||||||||| || || || || || ||||| | || ||||| || |||| |||||| Sbjct 3410894 GAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCAA 3410953 Query 164663 TACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTC 164722 || || |||||||| || ||||| | | |||||||| || || |||||| | || Sbjct 3410954 TATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGTA 3411013 Query 164723 GGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGTTTCAAC 164782 ||||| |||||||| ||| | || | ||||| |||| |||||| | || ||||| || Sbjct 3411014 GGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAAT 3411073 Query 164783 TTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTC 164842 |||||||| ||| | || ||| |||| |||||||| | || |||||||| || || | Sbjct 3411074 TTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATT 3411133 Query 164843 AACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTC 164902 ||||| ||| || || |||||||| ||| | || ||||||||||| || || ||| | Sbjct 3411134 AACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTTA 3411193 Query 164903 GACCTTGCTG 164912 || | |||| Sbjct 3411194 GATTTAGCTG 3411203 >seq9 Length=31747250 Score = 181 bits (200), Expect = 1e-40 Identities = 220/300 (73%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 165609 TGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAA 165668 |||||||| || || || || || ||||| || || |||||| | ||||| ||||| Sbjct 26587590 TGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAA 26587531 Query 165669 GGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGC 165728 || || ||||| ||||| | || || ||||| |||||||| || || ||| | || ||| Sbjct 26587530 GGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGC 26587471 Query 165729 GGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGT 165788 | ||| | || | || |||||||||| || ||||| |||||||| | |||||||||| Sbjct 26587470 GCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGT 26587411 Query 165789 GAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAACTTATTCCATG 165848 || ||||| || ||| || ||| | || || | || |||||||||| ||| Sbjct 26587410 GATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAAACTTATTCAATG 26587351 Query 165849 GTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGG 165908 || |||||||| || || ||||| || || ||||| ||||||| |||||| |||||| Sbjct 26587350 GTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCCAATAAACGTTGG 26587291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557393870835000